MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-147-v1

Family name MIR-147 (all species)
Seed UGUGCGG
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-147
Paralogues Aca-Mir-147-v2 
Orthologues Ami-Mir-147-v1  Bta-Mir-147  Cja-Mir-147  Cli-Mir-147  Cmi-Mir-147  Cpi-Mir-147-v1  Cpo-Mir-147-v1  Dno-Mir-147-v1  Eca-Mir-147  Gga-Mir-147  Hsa-Mir-147-v1  Lch-Mir-147  Loc-Mir-147-v1  Mal-Mir-147-v1  Mdo-Mir-147  Mml-Mir-147  Mmr-Mir-147  Mmu-Mir-147  Neu-Mir-147  Oan-Mir-147  Ocu-Mir-147  Pab-Mir-147  Pbv-Mir-147-v1  Pma-Mir-147  Rno-Mir-147-v1  Sha-Mir-147  Spt-Mir-147  Tgu-Mir-147  Tni-Mir-147 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343506.1: 18028-18087 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-147-v1)		 Mir-147-v1 GL343506.1: 18028-18087 [-] UCSC Ensembl
Mir-147-v2 GL343506.1: 18029-18086 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCUCUUCACGUGACACUCUAUGAAUCUAGUGGAAUCACUUCCGCACAAACUAGAUGAAUGAAACCAGUGUGCGGAAAUGCUUCUGCUACAUUUUUAGGGUCUCCCUCCAGCUUUUUGG
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Structure
        10          20        30        40        50         
UGCCUCUUCACGUGACA--|    U    C   UG   U  C         AACUAGAUG 
                   CUCUA GAAU UAG  GAA CA UUCCGCACA         A
                   GGGAU UUUA AUC  CUU GU AAGGCGUGU         A
GGUUUUUCGACCUCCCUCU^    U    C   GU   C  A         GACCAAAGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-147-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGGAAUCACUUCCGCACAAAC -22
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Mature sequence

Aca-Mir-147-v1_3p
mirBase accessionMIMAT0021779
Sequence 
38- GUGUGCGGAAAUGCUUCUGCUA -60
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