Mir-147

MirGeneDB ID

Mml-Mir-147

Family name

MIR-147 (all species)

Seed

UGUGCGG

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-147b

Paralogues

Orthologues

Aca-Mir-147-v1 Aca-Mir-147-v2 Ami-Mir-147-v1 Ami-Mir-147-v2 Bta-Mir-147 Cfa-Mir-147-P1-v1 Cfa-Mir-147-P1-v2 Cfa-Mir-147-P2-v1 Cfa-Mir-147-P2-v2 Cja-Mir-147 Cli-Mir-147 Cmi-Mir-147 Cpi-Mir-147-v1 Cpi-Mir-147-v2 Cpo-Mir-147-v1 Cpo-Mir-147-v2 Dno-Mir-147-v1 Dno-Mir-147-v2 Eca-Mir-147 Gga-Mir-147 Gja-Mir-147-P3a-v1 Gja-Mir-147-P3a-v2 Gja-Mir-147-P3b-v1 Gja-Mir-147-P3b-v2 Hsa-Mir-147-v1 Hsa-Mir-147-v2 Laf-Mir-147-P4 Laf-Mir-147-P5 Lch-Mir-147 Loc-Mir-147-v1 Loc-Mir-147-v2 Mal-Mir-147-v1 Mal-Mir-147-v2 Mdo-Mir-147 Mmr-Mir-147 Mmu-Mir-147 Neu-Mir-147 Oan-Mir-147 Ocu-Mir-147 Pab-Mir-147 Pbv-Mir-147-v1 Pbv-Mir-147-v2 Pma-Mir-147 Rno-Mir-147-v1 Rno-Mir-147-v2 Sha-Mir-147 Spt-Mir-147 Tgu-Mir-147 Tni-Mir-147

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014342.1: 21844647-21844706 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUUUAUUUCAAAGAGUACUCUAUAAAUCUAGUGGAAACAUUUCCGCACAAACUAGAUUCUGGACACCAGUGUGCGGAAGUGCUUCUGCUGCAUUUUUAGGGUUUGUCUACAUUUUUUGGG

Get precursor sequence

Structure

        10          20        30        40        50         
CUUUAUUUCAAAGAGUA--|    U    C   UG   A            AACUAGAUU 
                   CUCUA AAAU UAG  GAA CAUUUCCGCACA         C
                   GGGAU UUUA GUC  CUU GUGAAGGCGUGU         U
GGGUUUUUUACAUCUGUUU^    U    C   GU   C            GACCACAGG 
.       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-147_5p* (predicted)

mirBase accession

None

Sequence

0- GUGGAAACAUUUCCGCACAAAC -22

Get sequence

Mature sequence

Mml-Mir-147_3p

mirBase accession

MIMAT0006207

Sequence

38- GUGUGCGGAAGUGCUUCUGCUG -60

Get sequence

Proposed targets

TargetScanVert: mml-miR-147b