MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-147-v1

Family name MIR-147 (all species)
Seed UGUGCGG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-147
Paralogues Pbv-Mir-147-v2 
Orthologues Aca-Mir-147-v1  Ami-Mir-147-v1  Bta-Mir-147  Cja-Mir-147  Cli-Mir-147  Cmi-Mir-147  Cpi-Mir-147-v1  Cpo-Mir-147-v1  Dno-Mir-147-v1  Eca-Mir-147  Gga-Mir-147  Hsa-Mir-147-v1  Lch-Mir-147  Loc-Mir-147-v1  Mal-Mir-147-v1  Mdo-Mir-147  Mml-Mir-147  Mmr-Mir-147  Mmu-Mir-147  Neu-Mir-147  Oan-Mir-147  Ocu-Mir-147  Pab-Mir-147  Pma-Mir-147  Rno-Mir-147-v1  Sha-Mir-147  Spt-Mir-147  Tgu-Mir-147  Tni-Mir-147 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953790.1: 50396-50455 [-]
Clustered miRNAs
(< 50kb from Mir-147-v1)		 Mir-147-v1 KE953790.1: 50396-50455 [-]
Mir-147-v2 KE953790.1: 50397-50454 [-]
Precursor
(pre-Mir +30nt flank)
AGCCCCUCCAAACAACACUCUAUGAAUCUAGUGGAAUCACUUCUGCACAAACUAGAGGAUUGAAACCAGUGUGCGGAAAUGCUUCUGCUACAUUUUUAGAGUCUUCCUCCACUAUGUUUU
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Structure
        10          20        30        40        50         
AGCCCCUCCAAACAACA--|    U    C   UG   U  C         AACUAGAGG 
                   CUCUA GAAU UAG  GAA CA UUCUGCACA         A
                   GAGAU UUUA AUC  CUU GU AAGGCGUGU         U
UUUUGUAUCACCUCCUUCU^    U    C   GU   C  A         GACCAAAGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pbv-Mir-147-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGGAAUCACUUCUGCACAAAC -22
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Mature sequence

Pbv-Mir-147-v1_3p
mirBase accessionMIMAT0038963
Sequence 
38- GUGUGCGGAAAUGCUUCUGCUA -60
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