MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-205-P4a

Family name MIR-205 (all species)
Seed CCUUCAU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-205-P1-v1  Mal-Mir-205-P1-v2  Mal-Mir-205-P4b 
Orthologues Aca-Mir-205-P4  Ami-Mir-205-P4  Bta-Mir-205-P4  Cfa-Mir-205-P4  Cja-Mir-205-P4  Cli-Mir-205-P4  Cmi-Mir-205-P4  Cpi-Mir-205-P4  Cpo-Mir-205-P4  Dno-Mir-205-P4  Dre-Mir-205-P4a  Eca-Mir-205-P4  Ete-Mir-205-P4  Gga-Mir-205-P4  Gja-Mir-205-P4  Gmo-Mir-205-P4a  Hsa-Mir-205-P4  Laf-Mir-205-P4  Lch-Mir-205-P4  Loc-Mir-205-P4  Loc-Mir-205-P4-as  Mdo-Mir-205-P4  Mml-Mir-205-P4  Mmr-Mir-205-P4  Mmu-Mir-205-P4  Mun-Mir-205-P4  Neu-Mir-205-P4  Oan-Mir-205-P4  Ocu-Mir-205-P4  Pab-Mir-205-P4  Pbv-Mir-205-P4  Rno-Mir-205-P4  Sha-Mir-205-P4  Spt-Mir-205-P4  Sto-Mir-205-P4  Tgu-Mir-205-P4  Tni-Mir-205-P4a  Xtr-Mir-205-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884882.1: 485056-485115 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUUCCUACAAGAAUAUUCCAUGUAUUCUAUCCUUCAUUCCACCGGAGUCUGUAUCCGUACCUAACCAGAUUUCAGUGGUGUGAAGUGUAAGACGCAUGGGGAUACGACUUCAGCAGAUU
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Structure
        10          20        30        40        50         
ACUUCCUACAAGAAUAU--|     UA UC  UC      U    C        UAUCCG 
                   UCCAUG  U  UA  CUUCAU CCAC GGAGUCUG      U
                   GGGUAC  A  AU  GAAGUG GGUG CUUUAGAC      A
UUAGACGACUUCAGCAUAG^     GC GA  GU      U    A        CAAUCC 
.       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on the 5p arm.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-205-P4a_5p
mirBase accessionNone
Sequence 
0- UCCUUCAUUCCACCGGAGUCUG -22
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Star sequence

Mal-Mir-205-P4a_3p*
mirBase accessionNone
Sequence 
38- GAUUUCAGUGGUGUGAAGUGUA -60
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