MirGeneDB ID | Mml-Mir-205-P4 |
Family name |
MIR-205 (all species) |
Seed |
CCUUCAU |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-205
|
Paralogues |
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Orthologues |
Aca-Mir-205-P4
Ami-Mir-205-P4
Bta-Mir-205-P4
Cfa-Mir-205-P4
Cli-Mir-205-P4
Cmi-Mir-205-P4
Cpi-Mir-205-P4
Cpo-Mir-205-P4
Dno-Mir-205-P4
Dre-Mir-205-P4a
Ete-Mir-205-P4
Gga-Mir-205-P4
Gja-Mir-205-P4
Gmo-Mir-205-P4a
Gmo-Mir-205-P4b
Hsa-Mir-205-P4
Lch-Mir-205-P4
Loc-Mir-205-P4
Loc-Mir-205-P4-as
Mal-Mir-205-P4a
Mal-Mir-205-P4b
Mdo-Mir-205-P4
Mmu-Mir-205-P4
Mun-Mir-205-P4
Oan-Mir-205-P4
Ocu-Mir-205-P4
Pbv-Mir-205-P4
Rno-Mir-205-P4
Sha-Mir-205-P4
Spt-Mir-205-P4
Sto-Mir-205-P4
Tgu-Mir-205-P4
Tni-Mir-205-P4a
Xla-Mir-205-P4c
Xla-Mir-205-P4d
Xtr-Mir-205-P4
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (rheMac8_trace) |
chr1: 157131493-157131551 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAUCCUCAGGCAAUCCAUGUGCUUCUCUUGUCCUUCAUUCCACCGGAGUCUGUCUCAUACCCAACCAGAUUUCAGUGGAGUGAAGUUCAGGAGGCAUGGAGCUGACGACGAUGAGGCCU
Get precursor sequence
|
Structure | 10 20 30 40 50
GAUCCUCAGGCAAUCCAU----| UU UC C UCUCAU
GUGC CUCUUG CUUCAUUCCAC GGAGUCUG \
UACG GAGGAC GAAGUGAGGUG CUUUAGAC A
UCCGGAGUAGCAGCAGUCGAGG^ -- UU A CAACCC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-205-P4_5p |
mirBase accession | MIMAT0006236 |
Sequence |
0- UCCUUCAUUCCACCGGAGUCUGU -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-205
|
Star sequence |
Mml-Mir-205-P4_3p* |
mirBase accession | None |
Sequence |
37- GAUUUCAGUGGAGUGAAGUUCA -59
Get sequence
|