MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-205-P4

Family name MIR-205 (all species)
Seed CCUUCAU
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-205a
Paralogues Cli-Mir-205-P2 
Orthologues Aca-Mir-205-P4  Ami-Mir-205-P4  Bta-Mir-205-P4  Cfa-Mir-205-P4  Cja-Mir-205-P4  Cmi-Mir-205-P4  Cpi-Mir-205-P4  Cpo-Mir-205-P4  Dno-Mir-205-P4  Dre-Mir-205-P4a  Eca-Mir-205-P4  Ete-Mir-205-P4  Gga-Mir-205-P4  Gja-Mir-205-P4  Gmo-Mir-205-P4a  Gmo-Mir-205-P4b  Hsa-Mir-205-P4  Laf-Mir-205-P4  Lch-Mir-205-P4  Loc-Mir-205-P4  Loc-Mir-205-P4-as  Mal-Mir-205-P4a  Mal-Mir-205-P4b  Mdo-Mir-205-P4  Mml-Mir-205-P4  Mmr-Mir-205-P4  Mmu-Mir-205-P4  Mun-Mir-205-P4  Neu-Mir-205-P4  Oan-Mir-205-P4  Ocu-Mir-205-P4  Pab-Mir-205-P4  Pbv-Mir-205-P4  Rno-Mir-205-P4  Sha-Mir-205-P4  Spt-Mir-205-P4  Sto-Mir-205-P4  Tgu-Mir-205-P4  Tni-Mir-205-P4a  Xla-Mir-205-P4c  Xla-Mir-205-P4d  Xtr-Mir-205-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(colLiv2)		 scaffold454: 2679550-2679609 [+]
Precursor
(pre-Mir +30nt flank)
UGGAAUCAGGACAAUCCAUGGGUUCUGUUGUCCUUCAUUCCACCGGAGUCUGUCUCAUACCUAAACCAGAUUUCAGUGGAGUGAAGUACGAGAGACAUGGAGAUGAAUCAGCAAGGAGAG
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Structure
        10        20          30        40        50         
UGGAAUCAGGACAAUCCAUGGGU--|  G    C           C        UCUCAU 
                         UCU UUGU CUUCAUUCCAC GGAGUCUG      A
                         AGA AGCA GAAGUGAGGUG CUUUAGAC      C
GAGAGGAACGACUAAGUAGAGGUAC^  G    U           A        CAAAUC 
.       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on the 5p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
Li Mi Ov Pe Te To
Mature sequence

Cli-Mir-205-P4_5p
mirBase accessionMIMAT0038584
Sequence 
0- UCCUUCAUUCCACCGGAGUCUG -22
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Star sequence

Cli-Mir-205-P4_3p*
mirBase accessionMIMAT0038585
Sequence 
38- GAUUUCAGUGGAGUGAAGUACG -60
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