| MirGeneDB ID | Lch-Mir-205-P4 |
|---|---|
| Family name | MIR-205 (all species) |
| Seed | CCUUCAU |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-205-P1 |
| Orthologues | Aca-Mir-205-P4 Ami-Mir-205-P4 Bta-Mir-205-P4 Cfa-Mir-205-P4 Cli-Mir-205-P4 Cmi-Mir-205-P4 Cpi-Mir-205-P4 Cpo-Mir-205-P4 Dno-Mir-205-P4 Dre-Mir-205-P4a Ete-Mir-205-P4 Gga-Mir-205-P4 Gja-Mir-205-P4 Gmo-Mir-205-P4a Gmo-Mir-205-P4b Hsa-Mir-205-P4 Loc-Mir-205-P4 Loc-Mir-205-P4-as Mal-Mir-205-P4a Mal-Mir-205-P4b Mdo-Mir-205-P4 Mml-Mir-205-P4 Mmu-Mir-205-P4 Mun-Mir-205-P4 Oan-Mir-205-P4 Ocu-Mir-205-P4 Pbv-Mir-205-P4 Rno-Mir-205-P4 Sha-Mir-205-P4 Spt-Mir-205-P4 Sto-Mir-205-P4 Tgu-Mir-205-P4 Tni-Mir-205-P4a Xla-Mir-205-P4c Xla-Mir-205-P4d Xtr-Mir-205-P4 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH126576.1: 4009299-4009357 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | GAUUUCAGAGCAAUCCAUGCAUUUCUGUUGUCCUUCAUUCCACCGGAGUCUGUUUCAUAACCAAUCAGAUUUCAGUGGAGUGAAGUACAGGAGACAUGGAGUUAAAUCAACCAGUGAGCGet precursor sequence |
| Structure | 10 20 30 40 50 GAUUUCAGAGCAAUCCAUG--| U G C C UUUCAU CAU UCU UUGU CUUCAUUCCAC GGAGUCUG \ GUA AGA GACA GAAGUGAGGUG CUUUAGAC A CGAGUGACCAACUAAAUUGAG^ C G U A UAACCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Lch-Mir-205-P4_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCCUUCAUUCCACCGGAGUCUG -22
Get sequence
|
| Star sequence | Lch-Mir-205-P4_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- GAUUUCAGUGGAGUGAAGUACA -59
Get sequence
|
