MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-205-P4

Family name MIR-205 (all species)
Seed CCUUCAU
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-205-P4  Ami-Mir-205-P4  Bta-Mir-205-P4  Cfa-Mir-205-P4  Cja-Mir-205-P4  Cli-Mir-205-P4  Cmi-Mir-205-P4  Cpi-Mir-205-P4  Cpo-Mir-205-P4  Dno-Mir-205-P4  Dre-Mir-205-P4a  Eca-Mir-205-P4  Ete-Mir-205-P4  Gga-Mir-205-P4  Gja-Mir-205-P4  Gmo-Mir-205-P4a  Gmo-Mir-205-P4b  Hsa-Mir-205-P4  Laf-Mir-205-P4  Lch-Mir-205-P4  Loc-Mir-205-P4  Loc-Mir-205-P4-as  Mal-Mir-205-P4a  Mal-Mir-205-P4b  Mdo-Mir-205-P4  Mml-Mir-205-P4  Mmr-Mir-205-P4  Mmu-Mir-205-P4  Mun-Mir-205-P4  Oan-Mir-205-P4  Ocu-Mir-205-P4  Pab-Mir-205-P4  Pbv-Mir-205-P4  Rno-Mir-205-P4  Sha-Mir-205-P4  Spt-Mir-205-P4  Sto-Mir-205-P4  Tgu-Mir-205-P4  Tni-Mir-205-P4a  Xla-Mir-205-P4c  Xla-Mir-205-P4d  Xtr-Mir-205-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051814.1: 429406936-429406994 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGCUCAGGAUGAUCCAUGAGAUUCUCUUGUCCUUCAUUCCACCGGAGUCUGUCUCAUAUGUAAUCAGAUUUCAGUGGGGUGAAGCAUAAGAGGCGUGGAGUUGACUCAGCACCAGCAG
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Structure
        10        20          30        40        50         
GAGCUCAGGAUGAUCCAUGAGAU--|       C           C        UCUCAU 
                         UCUCUUGU CUUCAUUCCAC GGAGUCUG      \
                         GGAGAAUA GAAGUGGGGUG CUUUAGAC      A
GACGACCACGACUCAGUUGAGGUGC^       C           A        UAAUGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-205-P4_5p

mirBase accessionNone
Sequence
0- UCCUUCAUUCCACCGGAGUCUG -22
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Star sequence

Neu-Mir-205-P4_3p* (predicted)

mirBase accessionNone
Sequence
37- GAUUUCAGUGGGGUGAAGCAUA -59
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