MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-205-P4

Family name MIR-205 (all species)
Seed CCUUCAU
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-205
Paralogues
Orthologues Aca-Mir-205-P4  Ami-Mir-205-P4  Bta-Mir-205-P4  Cfa-Mir-205-P4  Cja-Mir-205-P4  Cli-Mir-205-P4  Cmi-Mir-205-P4  Cpi-Mir-205-P4  Dno-Mir-205-P4  Dre-Mir-205-P4a  Eca-Mir-205-P4  Ete-Mir-205-P4  Gga-Mir-205-P4  Gja-Mir-205-P4  Gmo-Mir-205-P4a  Gmo-Mir-205-P4b  Hsa-Mir-205-P4  Laf-Mir-205-P4  Lch-Mir-205-P4  Loc-Mir-205-P4  Loc-Mir-205-P4-as  Mal-Mir-205-P4a  Mal-Mir-205-P4b  Mdo-Mir-205-P4  Mml-Mir-205-P4  Mmr-Mir-205-P4  Mmu-Mir-205-P4  Mun-Mir-205-P4  Neu-Mir-205-P4  Oan-Mir-205-P4  Ocu-Mir-205-P4  Pab-Mir-205-P4  Pbv-Mir-205-P4  Rno-Mir-205-P4  Sha-Mir-205-P4  Spt-Mir-205-P4  Sto-Mir-205-P4  Tgu-Mir-205-P4  Tni-Mir-205-P4a  Xla-Mir-205-P4c  Xla-Mir-205-P4d  Xtr-Mir-205-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)		 scaffold_12: 13745521-13745577 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AAGGUCCAGGACCAUCCACGGGUUCUCUUGUCCUUCAUUCCACCGGAGUCUGUCUGCGGCAACCAGACUUCAGUGGAGUGAAGCUCAGGAGUCGUGGAGCUGCCGACGACAGUCACU
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Structure
        10             20        30        40        50        
AAGGUCCAGGACCAUCC-----|   GUU      UC           C        UCUGC 
                      ACGG   CUCUUG  CUUCAUUCCAC GGAGUCUG     \
                      UGCU   GAGGAC  GAAGUGAGGUG CUUCAGAC     G
UCACUGACAGCAGCCGUCGAGG^   ---      UC           A        CAACG 
     110       100           90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on the 5p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-205-P4_5p
mirBase accessionMIMAT0047101
Sequence 
0- UCCUUCAUUCCACCGGAGUCUG -22
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Star sequence

Cpo-Mir-205-P4_3p*
mirBase accessionMIMAT0047102
Sequence 
35- GACUUCAGUGGAGUGAAGCUCA -57
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