MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-138-P1

Family name MIR-138 (all species)
Seed GCUGGUG
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-138-1
Paralogues Oan-Mir-138-P2 
Orthologues Aca-Mir-138-P1  Ami-Mir-138-P1  Bta-Mir-138-P1  Cfa-Mir-138-P1  Cja-Mir-138-P1  Cli-Mir-138-P1  Cmi-Mir-138-P1  Cpo-Mir-138-P1  Dno-Mir-138-P1  Dre-Mir-138-P1a  Eca-Mir-138-P1  Ete-Mir-138-P1  Gga-Mir-138-P1  Gja-Mir-138-P1  Gmo-Mir-138-P1a  Gmo-Mir-138-P1b  Hsa-Mir-138-P1  Laf-Mir-138-P1  Lch-Mir-138-P1  Loc-Mir-138-P1  Mal-Mir-138-P1a  Mal-Mir-138-P1b  Mdo-Mir-138-P1  Mml-Mir-138-P1  Mmr-Mir-138-P1  Mmu-Mir-138-P1  Mun-Mir-138-P1  Neu-Mir-138-P1  Ocu-Mir-138-P1  Pab-Mir-138-P1  Pbv-Mir-138-P1  Pma-Mir-138-o1  Rno-Mir-138-P1  Sha-Mir-138-P1  Spt-Mir-138-P1  Sto-Mir-138-P1  Tgu-Mir-138-P1  Tni-Mir-138-P1a  Xla-Mir-138-P1c  Xla-Mir-138-P1d  Xtr-Mir-138-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041735.1: 51462583-51462643 [-]
Precursor
(pre-Mir +30nt flank)
UUUCCGCCCUGACUACCGGUAUGGUGAAGCAGCUGGUGUUGUGAAUCAGGCCGUCGCCAAUCUGAGAACGGCUACUUCACAACACCAGGGUUGCACCCUGCCACUGUCAACAACUCAAGGC
Get precursor sequence
Structure
        10          20        30        40        50        60 
UUUCCGCCCUGACUACC--|   U    A   AG             UCA     UCGCCAA 
                   GGUA GGUG AGC  CUGGUGUUGUGAA   GGCCG       \
                   CCGU CCAC UUG  GACCACAACACUU   UCGGC       U
CGGAACUCAACAACUGUCA^   C    G   G-             CA-     AAGAGUC 
 .       110       100        90         80         70
Deep sequencing
Go to detailed chart
CommentMirbase has the 5p arm as the 3p and hence the incorrect structure.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Oan-Mir-138-P1_5p
mirBase accessionMIMAT0007216
Sequence 
0- AGCUGGUGUUGUGAAUCAGGCCG -23
Get sequence
Star sequence

Oan-Mir-138-P1_3p*
mirBase accessionMIMAT0007216
Sequence 
40- GCUACUUCACAACACCAGGGU -61
Get sequence