MirGeneDB 3.0

MirGeneDB ID

Pbv-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-208
Paralogues
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Eca-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE957541.1: 31785-31844 [-]
Precursor
(pre-Mir +30nt flank)
CUCUCUUCACAGGUGCUUCCUCUAAUGGAGAAGCUUUUGGCUCGGGUUAUAUUUGAAAAUGGCAGUGUAUAAGACGAGCAAAAAGCUUGUUGGUUGGAGGAGAAAUCCCCAUUUUAAAAA
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Structure
        10          20        30        40        50         
CUCUCUUCACAGGUGCU--|        G  G        G     GG      UUGAAA 
                   UCCUCUAAU GA AAGCUUUU GCUCG  UUAUAU      A
                   AGGAGGUUG UU UUCGAAAA CGAGC  AAUAUG      U
AAAAAUUUUACCCCUAAAG^        G  G        A     AG      UGACGG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Pbv-Mir-208-P2_5p*

mirBase accessionMIMAT0039012
Sequence
0- AAGCUUUUGGCUCGGGUUAUAU -22
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Mature sequence

Pbv-Mir-208-P2_3p

mirBase accessionMIMAT0039013
Sequence
38- AUAAGACGAGCAAAAAGCUUGU -60
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