MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species Cow (Bos taurus)
MiRBase ID bta-mir-208a
Paralogues Bta-Mir-208-P1-v1  Bta-Mir-208-P1-v2 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Cfa-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Eca-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037337.1: 21534426-21534482 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P2)		 Mir-208-P1-v1 NC_037337.1: 21505525-21505581 [+] UCSC Ensembl
Mir-208-P1-v2 NC_037337.1: 21505525-21505581 [+] UCSC Ensembl
Mir-208-P2 NC_037337.1: 21534426-21534482 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGCCCCAACUCACUUCCUGUGACGGGCGAGCUUUUGGCCCGGGUUAUACCUGAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACCGCCGAUCAGCCUG
Get precursor sequence
Structure
        10          20        30        40        50        
GCUGGCCCCAACUCACU--|   G    G           G  C  GG      CUGAU 
                   UCCU UGAC GGCGAGCUUUU GC CG  UUAUAC     \
                   AGGA ACUG UUGUUCGAAAA CG GC  AAUAUG     G
GUCCGACUAGCCGCCAUCG^   G    G           A  A  AG      CACUC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-208-P2_5p*
mirBase accessionNone
Sequence 
0- GAGCUUUUGGCCCGGGUUAUAC -22
Get sequence
Mature sequence

Bta-Mir-208-P2_3p
mirBase accessionMIMAT0009261
Sequence 
35- AUAAGACGAGCAAAAAGCUUGU -57
Get sequence
Proposed targets TargetScanVert: bta-miR-208a