| MirGeneDB ID | Cja-Mir-208-P2 |
|---|---|
| Family name | MIR-208 (all species) |
| Seed | UAAGACG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-208-P1 |
| Orthologues | Aca-Mir-208-P2 Ami-Mir-208-P2 Bta-Mir-208-P2 Cfa-Mir-208-P2 Cpi-Mir-208-P2 Cpo-Mir-208-P2 Dno-Mir-208-P2 Eca-Mir-208-P2 Ete-Mir-208-P2 Gja-Mir-208-P2 Hsa-Mir-208-P2 Laf-Mir-208-P2 Lch-Mir-208-P2 Mdo-Mir-208-P2 Mml-Mir-208-P2 Mmu-Mir-208-P2 Oan-Mir-208-P2 Ocu-Mir-208-P2 Pab-Mir-208-P2 Pbv-Mir-208-P2 Rno-Mir-208-P2 Sha-Mir-208-P2 Spt-Mir-208-P2 Xla-Mir-208-P2a Xla-Mir-208-P2b Xtr-Mir-208-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 53549688-53549744 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUUUUGGCCCGGGUUAUACCUGAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACCGUCGAUCAGCCUGGet precursor sequence |
| Structure | 10 20 30 40 50 GCUGGCCCUGACCCACU--| G G G C GG CUGAU UCCU UGAC GGCGAGCUUUU GC CG UUAUAC \ AGGA ACUG UUGUUCGAAAA CG GC AAUAUG G GUCCGACUAGCUGCCAUCG^ G G A A AG CACUC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-208-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GAGCUUUUGGCCCGGGUUAUAC -22
Get sequence
|
| Mature sequence | Cja-Mir-208-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- AUAAGACGAGCAAAAAGCUUGU -57
Get sequence
|
