MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-208a
Paralogues Cfa-Mir-208-P1-v1  Cfa-Mir-208-P1-v2 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Eca-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr8: 3636925-3636981 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P2)		 Mir-208-P2 chr8: 3636925-3636981 [-] UCSC Ensembl
Mir-208-P1-v1 chr8: 3665170-3665226 [-] UCSC Ensembl
Mir-208-P1-v2 chr8: 3665170-3665226 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGCCCCGACUCACUUCCUGUGACGCAUGAGCUUUUGGCUCGGGUUAUACCUGAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUUCCAUCGAUCAGCCUG
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Structure
        10          20         30        40        50        
GCUGGCCCCGACUCACU--|   G    G - UG       G     GG      CUGAU 
                   UCCU UGAC C A  AGCUUUU GCUCG  UUAUAC     \
                   AGGA ACUG G U  UCGAAAA CGAGC  AAUAUG     G
GUCCGACUAGCUACCUUCG^   G    - U GU       A     AG      CACUC 
     110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-208-P2_5p*
mirBase accessionNone
Sequence 
0- GAGCUUUUGGCUCGGGUUAUAC -22
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Mature sequence

Cfa-Mir-208-P2_3p
mirBase accessionMIMAT0009868
Sequence 
35- AUAAGACGAGCAAAAAGCUUGU -57
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Proposed targets TargetScanVert: cfa-miR-208a
miRDB: MIMAT0009868