MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-208a
Paralogues Hsa-Mir-208-P1-v1  Hsa-Mir-208-P1-v2 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Eca-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(hg38)		 chr14: 23388602-23388658 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P2)		 Mir-208-P2 chr14: 23388602-23388658 [-] UCSC Ensembl
Mir-208-P1-v1 chr14: 23417997-23418053 [-] UCSC Ensembl
Mir-208-P1-v2 chr14: 23417997-23418053 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUUUUGGCCCGGGUUAUACCUGAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACCGUCGAUCAGCCUG
Get precursor sequence
Structure
        10          20        30        40        50        
GCUGGCCCUGACCCACU--|   G    G           G  C  GG      CUGAU 
                   UCCU UGAC GGCGAGCUUUU GC CG  UUAUAC     \
                   AGGA ACUG UUGUUCGAAAA CG GC  AAUAUG     G
GUCCGACUAGCUGCCAUCG^   G    G           A  A  AG      CACUC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-208-P2_5p*
mirBase accessionMIMAT0026474
Sequence 
0- GAGCUUUUGGCCCGGGUUAUAC -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-208a-5p
miRDB: MIMAT0026474
Mature sequence

Hsa-Mir-208-P2_3p
mirBase accessionMIMAT0000241
Sequence 
35- AUAAGACGAGCAAAAAGCUUGU -57
Get sequence
Proposed targets microrna.org: MIMAT0000241
TargetScanVert: hsa-miR-208a-3p
miRDB: MIMAT0000241