MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-208a
Paralogues Mdo-Mir-208-P1 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Eca-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 1: 172794240-172794296 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P2)		 Mir-208-P2 1: 172794240-172794296 [-] UCSC Ensembl
Mir-208-P1 1: 172843322-172843378 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGCCCUAGCCCACUUCCUGUGACAGGUGAGCUUUUGGUCCGGGUUAUACCUGAUGCAUGUGUAUAAGACGAGCAAAAAGCUCGUUGGUCGGAGGAUCCAUCAUCGGCCCAGGUA
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Structure
        10          20        30        40        50        
GCUGGCCCUAGCCCACU--|   G    AG          G UC  GG      CUGAU 
                   UCCU UGAC  GUGAGCUUUU G  CG  UUAUAC     \
                   AGGA GCUG  UGCUCGAAAA C  GC  AAUAUG     G
AUGGACCCGGCUACUACCU^   G    GU          A GA  AG      UGUAC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Star sequence

Mdo-Mir-208-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAGCUUUUGGUCCGGGUUAUAC -22
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Mature sequence

Mdo-Mir-208-P2_3p
mirBase accessionMIMAT0004129
Sequence 
35- AUAAGACGAGCAAAAAGCUCGU -57
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Proposed targets TargetScanVert: mdo-miR-208a