MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species Horse (Equus caballus)
MiRBase ID eca-mir-208a
Paralogues Eca-Mir-208-P1-v1  Eca-Mir-208-P1-v2 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009148.1: 163278781-163278837 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P2)		 Mir-208-P2 CM009148.1: 163278781-163278837 [-] UCSC Ensembl
Mir-208-P1-v1 CM009148.1: 163306881-163306937 [-] UCSC Ensembl
Mir-208-P1-v2 CM009148.1: 163306881-163306937 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGCCCUUACUCACUUCCUGUGACGGGCGAGCUUUUGGCCCGGGUUAUACCUGAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUCGACGAUCAGCCUG
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Structure
        10          20        30        40        50        
GCUGGCCCUUACUCACU--|   G    G           G  C  GG      CUGAU 
                   UCCU UGAC GGCGAGCUUUU GC CG  UUAUAC     \
                   AGGA ACUG UUGUUCGAAAA CG GC  AAUAUG     G
GUCCGACUAGCAGCUAUCG^   G    G           A  A  AG      CACUC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-208-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAGCUUUUGGCCCGGGUUAUAC -22
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Mature sequence

Eca-Mir-208-P2_3p
mirBase accessionMIMAT0012899
Sequence 
35- AUAAGACGAGCAAAAAGCUUGU -57
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