MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-208-P2b

Family name MIR-208 (all species)
Seed UAAGACG
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-208-P2a 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Eca-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xtr-Mir-208-P2 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030725.1: 115017032-115017088 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCCUACCUGUACAAUUCCUUUCAACAGGCAAGCUUUUUGUUUGGAUUAUGUUUCCUGUUGUUGUAUAAGACGAGCAUAAAGCUUGUUUGUUAGAAGGCUGUGCUUCGCCCUAUGCU
Get precursor sequence
Structure
        10          20        30        40        50        
ACCCUACCUGUACAAUU--|   UC              U      GA     UUUCCU 
                   CCUU  AACAGGCAAGCUUU UGUUUG  UUAUG      \
                   GGAA  UUGUUUGUUCGAAA ACGAGC  AAUAU      G
UCGUAUCCCGCUUCGUGUC^   GA              U      AG     GUUGUU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg Em Em He Ki Re St St
Star sequence

Xla-Mir-208-P2b_5p*
mirBase accessionNone
Sequence 
0- AAGCUUUUUGUUUGGAUUAUGU -22
Get sequence
Mature sequence

Xla-Mir-208-P2b_3p
mirBase accessionNone
Sequence 
35- AUAAGACGAGCAUAAAGCUUGU -57
Get sequence