MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-208-P2

Family name MIR-208 (all species)
Seed AGCUUUU
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-208
Paralogues
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cja-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Eca-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Laf-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Mmu-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pab-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr1: 127564546-127564602 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCCUAUCUGUUCAAUUCCUUUCAACAGGCAAGCUUUUUGCUUGGAUUAUGUUUUCUGUUGUUGUAUAAGACGAGCAUAAAGCUUGUUUGUUAGAAGGCUGUGCUUCGCCCUAUGCU
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Structure
        10          20        30        40        50        
ACCCUAUCUGUUCAAUU--|   UC              U      GA     UUUUCU 
                   CCUU  AACAGGCAAGCUUU UGCUUG  UUAUG      \
                   GGAA  UUGUUUGUUCGAAA ACGAGC  AAUAU      G
UCGUAUCCCGCUUCGUGUC^   GA              U      AG     GUUGUU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-208-P2_5p
mirBase accessionNone
Sequence 
0- AAGCUUUUUGCUUGGAUUAUGU -22
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Star sequence

Xtr-Mir-208-P2_3p*
mirBase accessionMIMAT0003698
Sequence 
35- AUAAGACGAGCAUAAAGCUUGU -57
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Proposed targets TargetScanVert: xtr-miR-208