MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-181-P2a3

Family name MIR-181 (all species)
Seed UCGCUGA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-181-P1a3  Xla-Mir-181-P1a4  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xla-Mir-181-P2a4  Xla-Mir-181-P2b3  Xla-Mir-181-P2b4 
Orthologues Aca-Mir-181-P2a  Ami-Mir-181-P2a  Bta-Mir-181-P2a  Cfa-Mir-181-P2a  Cja-Mir-181-P2a  Cli-Mir-181-P2a  Cmi-Mir-181-P2a  Cpi-Mir-181-P2a  Cpo-Mir-181-P2a  Dno-Mir-181-P2a  Eca-Mir-181-P2a  Ete-Mir-181-P2a  Gga-Mir-181-P2a  Gja-Mir-181-P2a  Hsa-Mir-181-P2a  Laf-Mir-181-P2a  Lch-Mir-181-P2a  Loc-Mir-181-P2a  Mdo-Mir-181-P2a  Mml-Mir-181-P2a  Mmr-Mir-181-P2a  Mmu-Mir-181-P2a  Mun-Mir-181-P2a  Neu-Mir-181-P2a  Oan-Mir-181-P2a  Ocu-Mir-181-P2a  Pab-Mir-181-P2a  Pbv-Mir-181-P2a  Rno-Mir-181-P2a  Sha-Mir-181-P2a  Spt-Mir-181-P2a  Sto-Mir-181-P2a  Tgu-Mir-181-P2a  Xtr-Mir-181-P2a 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030730.1: 102895249-102895309 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAAAGAAAAGUCAAUGCAAGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUGAGUUAAGAACACAAGCUCGCUGAACGAUGAAUGCAACUGUGUCCCUGAUUUAUCCAGACAAGAAGA
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Structure
        10          20        30        40        50        60 
ACAAAGAAAAGUCAAUG--| A  U    AUCAA         CUG          GAGUUA 
                   CA GG CACA     CAUUCAUUG   UCGGUGGGUU      A
                   GU CC GUGU     GUAAGUAGC   AGUCGCUCGA      G
AGAAGAACAGACCUAUUUA^ C  U    CAAC-         A--          ACACAA 
 .       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Eg Em Em He Ki Re St St
Star sequence

Xla-Mir-181-P2a3_5p*
mirBase accessionNone
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUU -24
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Mature sequence

Xla-Mir-181-P2a3_3p
mirBase accessionNone
Sequence 
40- CUCGCUGAACGAUGAAUGCAA -61
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