MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-181-P2a

Family name MIR-181 (all species)
Seed ACAUUCA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-181b-1
Paralogues Pbv-Mir-181-P1b  Pbv-Mir-181-P1c  Pbv-Mir-181-P2b  Pbv-Mir-181-P2c 
Orthologues Aca-Mir-181-P2a  Ami-Mir-181-P2a  Bta-Mir-181-P2a  Cfa-Mir-181-P2a  Cja-Mir-181-P2a  Cli-Mir-181-P2a  Cmi-Mir-181-P2a  Cpi-Mir-181-P2a  Cpo-Mir-181-P2a  Dno-Mir-181-P2a  Dre-Mir-181-P2a1  Dre-Mir-181-P2a2  Eca-Mir-181-P2a  Ete-Mir-181-P2a  Gga-Mir-181-P2a  Gja-Mir-181-P2a  Gmo-Mir-181-P2a1  Hsa-Mir-181-P2a  Laf-Mir-181-P2a  Lch-Mir-181-P2a  Loc-Mir-181-P2a  Mal-Mir-181-P2a1  Mdo-Mir-181-P2a  Mml-Mir-181-P2a  Mmr-Mir-181-P2a  Mmu-Mir-181-P2a  Mun-Mir-181-P2a  Neu-Mir-181-P2a  Oan-Mir-181-P2a  Ocu-Mir-181-P2a  Pab-Mir-181-P2a  Rno-Mir-181-P2a  Sha-Mir-181-P2a  Spt-Mir-181-P2a  Sto-Mir-181-P2a  Tgu-Mir-181-P2a  Tni-Mir-181-P2a1  Xla-Mir-181-P2a3  Xla-Mir-181-P2a4  Xtr-Mir-181-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE954498.1: 230963-231022 [+]
Precursor
(pre-Mir +30nt flank)
CACUUAUAUCCACAAAAAAAGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUUAACUUUGUGGACAAGCUCACUGAACAAUGAAUGCAACUGUGGCCCCACAUUUUACAAUCACAGCC
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Structure
        10        20         30        40        50        60 
CACUUAUAUCCACAAAAAAA-|      AUCAA         CUG           AACUU 
                     GGUCACA     CAUUCAUUG   UCGGUGGGUUU     U
                     CCGGUGU     GUAAGUAAC   AGUCACUCGAA     G
CCGACACUAACAUUUUACACC^      CAAC-         A--           CAGGU 
.       110       100        90         80          70
Deep sequencing
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CommentThere is a second Dicer cut +1 on the 3p arm.
3' NTU Yes
MotifsNo
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-181-P2a_5p
mirBase accessionMIMAT0038977
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUUU -25
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Star sequence

Pbv-Mir-181-P2a_3p*
mirBase accessionMIMAT0038978
Sequence 
39- GCUCACUGAACAAUGAAUGCA -60
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