MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-181-P2a

Family name MIR-181 (all species)
Seed ACAUUCA
Species Cow (Bos taurus)
MiRBase ID bta-mir-181b-1
Paralogues Bta-Mir-181-P1a  Bta-Mir-181-P1b  Bta-Mir-181-P1c  Bta-Mir-181-P2b  Bta-Mir-181-P2c 
Orthologues Aca-Mir-181-P2a  Ami-Mir-181-P2a  Cfa-Mir-181-P2a  Cja-Mir-181-P2a  Cli-Mir-181-P2a  Cmi-Mir-181-P2a  Cpi-Mir-181-P2a  Cpo-Mir-181-P2a  Dno-Mir-181-P2a  Dre-Mir-181-P2a1  Dre-Mir-181-P2a2  Eca-Mir-181-P2a  Ete-Mir-181-P2a  Gga-Mir-181-P2a  Gja-Mir-181-P2a  Gmo-Mir-181-P2a1  Hsa-Mir-181-P2a  Laf-Mir-181-P2a  Lch-Mir-181-P2a  Loc-Mir-181-P2a  Mal-Mir-181-P2a1  Mdo-Mir-181-P2a  Mml-Mir-181-P2a  Mmr-Mir-181-P2a  Mmu-Mir-181-P2a  Mun-Mir-181-P2a  Neu-Mir-181-P2a  Oan-Mir-181-P2a  Ocu-Mir-181-P2a  Pab-Mir-181-P2a  Pbv-Mir-181-P2a  Rno-Mir-181-P2a  Sha-Mir-181-P2a  Spt-Mir-181-P2a  Sto-Mir-181-P2a  Tgu-Mir-181-P2a  Tni-Mir-181-P2a1  Xla-Mir-181-P2a3  Xla-Mir-181-P2a4  Xtr-Mir-181-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037343.1: 77762678-77762738 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P2a)		 Mir-181-P2a NC_037343.1: 77762678-77762738 [-] UCSC Ensembl
Mir-181-P1a NC_037343.1: 77762860-77762922 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGAGGUUCUUUCUUAAAAGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUGAACUGUGUGGACAAGCUCACUGAACAAUGAGUGCAACUGUGGCCCCGCAUUAUGCGAGCAUGGUCA
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Structure
        10        20          30        40        50        60 
GCAGAGGUUCUUUCUUAAAA--|      AUCAA         CUG          GAACUG 
                      GGUCACA     CAUUCAUUG   UCGGUGGGUU      U
                      CCGGUGU     GUGAGUAAC   AGUCACUCGA      G
ACUGGUACGAGCGUAUUACGCC^      CAAC-         A--          ACAGGU 
 .       110       100        90         80          70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-181-P2a_5p
mirBase accessionMIMAT0003793
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUU -24
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Proposed targets TargetScanVert: bta-miR-181b
Star sequence

Bta-Mir-181-P2a_3p*
mirBase accessionNone
Sequence 
40- CUCACUGAACAAUGAGUGCAA -61
Get sequence