Mir-181-P2a

MirGeneDB ID

Mml-Mir-181-P2a

Family name

MIR-181 (all species)

Seed

ACAUUCA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-181b-1

Paralogues

Mml-Mir-181-P1a Mml-Mir-181-P1b Mml-Mir-181-P1c Mml-Mir-181-P2b Mml-Mir-181-P2c

Orthologues

Aca-Mir-181-P2a Ami-Mir-181-P2a Bta-Mir-181-P2a Cfa-Mir-181-P2a Cja-Mir-181-P2a Cli-Mir-181-P2a Cmi-Mir-181-P2a Cpi-Mir-181-P2a Cpo-Mir-181-P2a Dno-Mir-181-P2a Dre-Mir-181-P2a1 Dre-Mir-181-P2a2 Eca-Mir-181-P2a Ete-Mir-181-P2a Gga-Mir-181-P2a Gja-Mir-181-P2a Gmo-Mir-181-P2a1 Hsa-Mir-181-P2a Laf-Mir-181-P2a Lch-Mir-181-P2a Loc-Mir-181-P2a Mal-Mir-181-P2a1 Mdo-Mir-181-P2a Mmr-Mir-181-P2a Mmu-Mir-181-P2a Mun-Mir-181-P2a Neu-Mir-181-P2a Oan-Mir-181-P2a Ocu-Mir-181-P2a Pab-Mir-181-P2a Pbv-Mir-181-P2a Rno-Mir-181-P2a Sha-Mir-181-P2a Spt-Mir-181-P2a Sto-Mir-181-P2a Tgu-Mir-181-P2a Tni-Mir-181-P2a1 Xla-Mir-181-P2a3 Xla-Mir-181-P2a4 Xtr-Mir-181-P2a

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014336.1: 56288147-56288207 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-181-P2a)

Mir-181-P2a CM014336.1: 56288147-56288207 [-] UCSC Ensembl
Mir-181-P1a CM014336.1: 56288329-56288390 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GCAGAGAUUAUUUUUUAAAAGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUGAACUGUGUAGACAAGCUCACUGAACAAUGAAUGCAACUGUGGCCCCGCUUUUUGCUGUCACAAUCA

Get precursor sequence

Structure

        10        20          30        40        50        60 
GCAGAGAUUAUUUUUUAAAA--|      AUCAA         CUG          GAACUG 
                      GGUCACA     CAUUCAUUG   UCGGUGGGUU      U
                      CCGGUGU     GUAAGUAAC   AGUCACUCGA      G
ACUAACACUGUCGUUUUUCGCC^      CAAC-         A--          ACAGAU 
 .       110       100        90         80          70

Deep sequencing

Go to detailed chart

3' NTU

Yes

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-181-P2a_5p

mirBase accession

MIMAT0002623

Sequence

0- AACAUUCAUUGCUGUCGGUGGGUU -24

Get sequence

Proposed targets

TargetScanVert: mml-miR-181b-5p

Star sequence

Mml-Mir-181-P2a_3p*

mirBase accession

MIMAT0026592

Sequence

40- CUCACUGAACAAUGAAUGCAA -61

Get sequence

Proposed targets

TargetScanVert: mml-miR-181b-1-3p