MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-181-P1b

Family name MIR-181 (all species)
Seed ACAUUCA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-181a-2
Paralogues Mml-Mir-181-P1a  Mml-Mir-181-P1c  Mml-Mir-181-P2a  Mml-Mir-181-P2b  Mml-Mir-181-P2c 
Orthologues Aca-Mir-181-P1b  Ami-Mir-181-P1b  Bta-Mir-181-P1b  Cfa-Mir-181-P1b  Cli-Mir-181-P1b  Cmi-Mir-181-P1b  Cpi-Mir-181-P1b  Cpo-Mir-181-P1b  Dno-Mir-181-P1b  Dre-Mir-181-P1b2  Ete-Mir-181-P1b  Gga-Mir-181-P1b  Gja-Mir-181-P1b  Gmo-Mir-181-P1b2  Hsa-Mir-181-P1b  Lch-Mir-181-P1b  Loc-Mir-181-P1b  Mal-Mir-181-P1b2  Mdo-Mir-181-P1b  Mmu-Mir-181-P1b  Mun-Mir-181-P1b  Oan-Mir-181-P1b  Ocu-Mir-181-P1b  Pbv-Mir-181-P1b  Rno-Mir-181-P1b  Sha-Mir-181-P1b  Spt-Mir-181-P1b  Sto-Mir-181-P1b  Tgu-Mir-181-P1b  Tni-Mir-181-P1b1  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xtr-Mir-181-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rheMac8_trace)
chr15: 14342725-14342784 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1b)
Mir-181-P2b chr15: 14341502-14341561 [-] UCSC Ensembl
Mir-181-P1b chr15: 14342725-14342784 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCAGGCCAGCCUUCAGAGGACUCCAAGGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUUGAAAAAACCACUGACCGUUGACUGUACCUCGGGGUCCUUACAGACGACACUACAUUUC
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Structure
        10          20        30        40        50        60 
UAUCAGGCCAGCCUUCA--|        A   A   U      CU       A  UUGGGAU 
                   GAGGACUCC AGG ACA UCAACG  GUCGGUG GU       \
                   UUCCUGGGG UCC UGU AGUUGC  CAGUCAC CA       U
CUUUACAUCACAGCAGACA^        C   A   C      --       -  AAAAAGU 
.       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-181-P1b_5p

mirBase accessionMIMAT0002506
Sequence
0- AACAUUCAACGCUGUCGGUGAGU -23
Get sequence
Proposed targets TargetScanVert: mml-miR-181a-5p
Star sequence

Mml-Mir-181-P1b_3p*

mirBase accessionNone
Sequence
38- ACCACUGACCGUUGACUGUACC -60
Get sequence