MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-181-P1c

Family name MIR-181 (all species)
Seed ACAUUCA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-181c
Paralogues Mml-Mir-181-P1a  Mml-Mir-181-P1b  Mml-Mir-181-P2a  Mml-Mir-181-P2b  Mml-Mir-181-P2c 
Orthologues Aca-Mir-181-P1c  Ami-Mir-181-P1c  Bta-Mir-181-P1c  Cfa-Mir-181-P1c  Cmi-Mir-181-P1c  Cpi-Mir-181-P1c  Cpo-Mir-181-P1c  Dno-Mir-181-P1c  Dre-Mir-181-P1c1  Dre-Mir-181-P1c2  Ete-Mir-181-P1c  Gja-Mir-181-P1c  Gmo-Mir-181-P1c1  Gmo-Mir-181-P1c2  Hsa-Mir-181-P1c  Lch-Mir-181-P1c  Loc-Mir-181-P1c  Mal-Mir-181-P1c1  Mal-Mir-181-P1c2  Mdo-Mir-181-P1c  Mmu-Mir-181-P1c  Mun-Mir-181-P1c  Oan-Mir-181-P1c  Ocu-Mir-181-P1c  Pbv-Mir-181-P1c  Rno-Mir-181-P1c  Sha-Mir-181-P1c  Spt-Mir-181-P1c  Sto-Mir-181-P1c  Tni-Mir-181-P1c1  Tni-Mir-181-P1c2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rheMac8_trace)
chr19: 13878557-13878617 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1c)
Mir-24-P3 chr19: 13838862-13838921 [-] UCSC Ensembl
Mir-27-P3 chr19: 13839020-13839081 [-] UCSC Ensembl
Mir-23-P3 chr19: 13839164-13839222 [-] UCSC Ensembl
Mir-181-P1c chr19: 13878557-13878617 [+] UCSC Ensembl
Mir-181-P2c chr19: 13878742-13878804 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCCCGGAGAAUUUGCCAAGGGUUUGGGGGAACAUUCAACCUGUCGGUGAGUUUGGGCAGCUCAGGCAAACCAUCGACCGUUGAGUGGACCCUGAGACCUGGACUUGCCAUCCUCCUUCCG
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Structure
        10          20        30        40        50        60 
GUCCCGGAGAAUUUGCCAA--|     G    AA        CU       A   UGGGCAG 
                     GGGUUU GGGG  CAUUCAAC  GUCGGUG GUU       \
                     UCCAGA UCCC  GUGAGUUG  CAGCUAC CAA       C
GCCUUCCUCCUACCGUUCAGG^     G    AG        C-       -   ACGGACU 
 .       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-181-P1c_5p

mirBase accessionMIMAT0002509
Sequence
0- AACAUUCAACCUGUCGGUGAGUU -23
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Proposed targets TargetScanVert: mml-miR-181c-5p
Star sequence

Mml-Mir-181-P1c_3p*

mirBase accessionMIMAT0026587
Sequence
39- ACCAUCGACCGUUGAGUGGACC -61
Get sequence
Proposed targets TargetScanVert: mml-miR-181c-3p