MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-181-P1c

Family name MIR-181 (all species)
Seed ACAUUCA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-181-P1a  Pab-Mir-181-P1b  Pab-Mir-181-P2a  Pab-Mir-181-P2b  Pab-Mir-181-P2c 
Orthologues Aca-Mir-181-P1c  Ami-Mir-181-P1c  Bta-Mir-181-P1c  Cfa-Mir-181-P1c  Cja-Mir-181-P1c  Cmi-Mir-181-P1c  Cpi-Mir-181-P1c  Cpo-Mir-181-P1c  Dno-Mir-181-P1c  Dre-Mir-181-P1c1  Dre-Mir-181-P1c2  Eca-Mir-181-P1c  Ete-Mir-181-P1c  Gja-Mir-181-P1c  Gmo-Mir-181-P1c1  Gmo-Mir-181-P1c2  Hsa-Mir-181-P1c  Laf-Mir-181-P1c  Lch-Mir-181-P1c  Loc-Mir-181-P1c  Mal-Mir-181-P1c1  Mal-Mir-181-P1c2  Mdo-Mir-181-P1c  Mml-Mir-181-P1c  Mmr-Mir-181-P1c  Mmu-Mir-181-P1c  Mun-Mir-181-P1c  Neu-Mir-181-P1c  Oan-Mir-181-P1c  Ocu-Mir-181-P1c  Pbv-Mir-181-P1c  Rno-Mir-181-P1c  Sha-Mir-181-P1c  Spt-Mir-181-P1c  Sto-Mir-181-P1c  Tni-Mir-181-P1c1  Tni-Mir-181-P1c2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054699.2: 13913985-13914045 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCCCGGAAAAUUUGCCAAGGGUUUGGGGGAACAUUCAACCUGUCGGUGAGUUUGGGCAGCUCAGGCAAACCAUCGACCGUUGAGUGGACCCUGAGACCUGGAAUUGCCAUCCUCCUGCCG
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Structure
        10          20        30        40        50        60 
GUCCCGGAAAAUUUGCCAA--|     G    AA        CU       A   UGGGCAG 
                     GGGUUU GGGG  CAUUCAAC  GUCGGUG GUU       \
                     UCCAGA UCCC  GUGAGUUG  CAGCUAC CAA       C
GCCGUCCUCCUACCGUUAAGG^     G    AG        C-       -   ACGGACU 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-181-P1c_5p
mirBase accessionNone
Sequence 
0- AACAUUCAACCUGUCGGUGAGUU -23
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Star sequence

Pab-Mir-181-P1c_3p*
mirBase accessionNone
Sequence 
39- ACCAUCGACCGUUGAGUGGACC -61
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