| MirGeneDB ID | Pab-Mir-181-P2c |
|---|---|
| Family name | MIR-181 (all species) |
| Seed | ACAUUCA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-181-P1a Pab-Mir-181-P1b Pab-Mir-181-P1c Pab-Mir-181-P2a Pab-Mir-181-P2b |
| Orthologues | Aca-Mir-181-P2c Ami-Mir-181-P2c Bta-Mir-181-P2c Cfa-Mir-181-P2c Cja-Mir-181-P2c Cmi-Mir-181-P2c Cpi-Mir-181-P2c Dno-Mir-181-P2c Dre-Mir-181-P2c1 Dre-Mir-181-P2c2 Eca-Mir-181-P2c Ete-Mir-181-P2c Gmo-Mir-181-P2c1 Gmo-Mir-181-P2c2 Hsa-Mir-181-P2c Laf-Mir-181-P2c Lch-Mir-181-P2c Loc-Mir-181-P2c Mal-Mir-181-P2c1 Mal-Mir-181-P2c2 Mdo-Mir-181-P2c Mml-Mir-181-P2c Mmr-Mir-181-P2c Mmu-Mir-181-P2c Mun-Mir-181-P2c Neu-Mir-181-P2c Oan-Mir-181-P2c Ocu-Mir-181-P2c Pbv-Mir-181-P2c Rno-Mir-181-P2c Sha-Mir-181-P2c Spt-Mir-181-P2c3 Spt-Mir-181-P2c4 Sto-Mir-181-P2c Tni-Mir-181-P2c1-v1 Tni-Mir-181-P2c1-v2 Tni-Mir-181-P2c2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054699.2: 13914170-13914232 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUCCCCUAGGCCACAGCCAAGGUCACAAUCAACAUUCAUUGUUGUCGGUGGGUUGUGAGGACCGAGGCCAGACCCACCGGGGGAUGAAUGUCACUGUGGCUGGGCCAGACACGGCUUAAGGGGGet precursor sequence |
| Structure | 10 20 30 40 50 60 CUCCCCUAGGCCACAGCCAA--| AUCA G UG GUGAGGA GGUCACA ACAUUCAUU U UCGGUGGGUU C UCGGUGU UGUAAGUAG G GGCCACCCAG C GGGGAAUUCGGCACAGACCGGG^ CAC- G -- ACCGGAG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Yes |
| Motifs | UGUG in loop |
| Mature sequence | Pab-Mir-181-P2c_5p |
| mirBase accession | None |
| Sequence |
0- AACAUUCAUUGUUGUCGGUGGGUU -24
Get sequence
|
| Star sequence | Pab-Mir-181-P2c_3p* |
| mirBase accession | None |
| Sequence |
43- CCACCGGGGGAUGAAUGUCA -63
Get sequence
|
