MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-181-P2c1

Family name MIR-181 (all species)
Seed ACAUUCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-181-P1a1  Mal-Mir-181-P1b2  Mal-Mir-181-P1c1  Mal-Mir-181-P1c2  Mal-Mir-181-P2a1  Mal-Mir-181-P2b2  Mal-Mir-181-P2c2 
Orthologues Aca-Mir-181-P2c  Ami-Mir-181-P2c  Bta-Mir-181-P2c  Cfa-Mir-181-P2c  Cja-Mir-181-P2c  Cmi-Mir-181-P2c  Cpi-Mir-181-P2c  Dno-Mir-181-P2c  Dre-Mir-181-P2c1  Eca-Mir-181-P2c  Ete-Mir-181-P2c  Gmo-Mir-181-P2c1  Hsa-Mir-181-P2c  Laf-Mir-181-P2c  Lch-Mir-181-P2c  Loc-Mir-181-P2c  Mdo-Mir-181-P2c  Mml-Mir-181-P2c  Mmr-Mir-181-P2c  Mmu-Mir-181-P2c  Mun-Mir-181-P2c  Neu-Mir-181-P2c  Oan-Mir-181-P2c  Ocu-Mir-181-P2c  Pab-Mir-181-P2c  Pbv-Mir-181-P2c  Rno-Mir-181-P2c  Sha-Mir-181-P2c  Sto-Mir-181-P2c  Tni-Mir-181-P2c1-v1  Tni-Mir-181-P2c1-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884860.1: 49996-50056 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACUCUACCCAAAGACCAAAGGUCACAAUCAACAUUCAUUGCUGUCGCUGGGUUGGACUGUGUAGAAAAGCUCAAUGAACAAUGAGUGCAACUGUGGCCCAGAUCUGCCUGACUCGUGUCU
Get precursor sequence
Structure
        10        20          30        40        50        60 
CACUCUACCCAAAGACCAAA--|      AUCAA         CUG   C      GGACUG 
                      GGUCACA     CAUUCAUUG   UCG UGGGUU      U
                      CCGGUGU     GUGAGUAAC   AGU ACUCGA      G
UCUGUGCUCAGUCCGUCUAGAC^      CAAC-         A--   A      AAAGAU 
 .       110       100        90         80          70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-181-P2c1_5p
mirBase accessionNone
Sequence 
0- AACAUUCAUUGCUGUCGCUGGGUU -24
Get sequence
Star sequence

Mal-Mir-181-P2c1_3p* (predicted)
mirBase accessionNone
Sequence 
40- CUCAAUGAACAAUGAGUGCAA -61
Get sequence