MirGeneDB 2.1
MirGeneDB ID

Pbv-Mir-181-P2c

Family name MIR-181 (all species)
Seed ACAUUCA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-181c
Paralogues Pbv-Mir-181-P1b  Pbv-Mir-181-P1c  Pbv-Mir-181-P2a  Pbv-Mir-181-P2b 
Orthologues Aca-Mir-181-P2c  Ami-Mir-181-P2c  Bta-Mir-181-P2c  Cfa-Mir-181-P2c  Cmi-Mir-181-P2c  Cpi-Mir-181-P2c  Dno-Mir-181-P2c  Dre-Mir-181-P2c1  Dre-Mir-181-P2c2  Ete-Mir-181-P2c  Gmo-Mir-181-P2c1  Gmo-Mir-181-P2c2  Hsa-Mir-181-P2c  Lch-Mir-181-P2c  Loc-Mir-181-P2c  Mal-Mir-181-P2c1  Mal-Mir-181-P2c2  Mdo-Mir-181-P2c  Mml-Mir-181-P2c  Mmu-Mir-181-P2c  Mun-Mir-181-P2c  Oan-Mir-181-P2c  Ocu-Mir-181-P2c  Rno-Mir-181-P2c  Sha-Mir-181-P2c  Spt-Mir-181-P2c3  Spt-Mir-181-P2c4  Sto-Mir-181-P2c  Tni-Mir-181-P2c1-v1  Tni-Mir-181-P2c1-v2  Tni-Mir-181-P2c2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953590.1: 289011-289073 [+]
Clustered miRNAs
(< 50kb from Mir-181-P2c)		 Mir-181-P1c KE953590.1: 288472-288533 [+]
Mir-181-P2c KE953590.1: 289011-289073 [+]
Precursor
(pre-Mir +30nt flank)
AGAGUCUCCAAAACCUACAAAGUCACAAUCAACAUUCAUUCUGUCGGUGGGUUGUUAUGCUGGAGGAGAAGCUCACUGAUCAGUGAAUGCAACUGUGGCUGGAAAAGACACUGGGCCAGCAGA
Get precursor sequence
Structure
        10        20           30        40        50        60 
AGAGUCUCCAAAACCUACAA---|      AUCAA        CU           GUUAUGC 
                       AGUCACA     CAUUCAUU  GUCGGUGGGUU       U
                       UCGGUGU     GUAAGUGA  UAGUCACUCGA       G
AGACGACCGGGUCACAGAAAAGG^      CAAC-        C-           AGAGGAG 
 120       110       100        90          80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-181-P2c_5p
mirBase accessionMIMAT0038979
Sequence 
0- AACAUUCAUUCUGUCGGUGGGUU -23
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Star sequence

Pbv-Mir-181-P2c_3p* (predicted)
mirBase accessionNone
Sequence 
41- CUCACUGAUCAGUGAAUGCAAC -63
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