MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-181-P2c

Family name MIR-181 (all species)
Seed ACAUUCA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-181-P1a  Ete-Mir-181-P1b  Ete-Mir-181-P1c  Ete-Mir-181-P2a  Ete-Mir-181-P2b 
Orthologues Aca-Mir-181-P2c  Ami-Mir-181-P2c  Bta-Mir-181-P2c  Cfa-Mir-181-P2c  Cja-Mir-181-P2c  Cmi-Mir-181-P2c  Cpi-Mir-181-P2c  Dno-Mir-181-P2c  Dre-Mir-181-P2c1  Dre-Mir-181-P2c2  Eca-Mir-181-P2c  Gmo-Mir-181-P2c1  Gmo-Mir-181-P2c2  Hsa-Mir-181-P2c  Laf-Mir-181-P2c  Lch-Mir-181-P2c  Loc-Mir-181-P2c  Mal-Mir-181-P2c1  Mal-Mir-181-P2c2  Mdo-Mir-181-P2c  Mml-Mir-181-P2c  Mmr-Mir-181-P2c  Mmu-Mir-181-P2c  Mun-Mir-181-P2c  Neu-Mir-181-P2c  Oan-Mir-181-P2c  Ocu-Mir-181-P2c  Pab-Mir-181-P2c  Pbv-Mir-181-P2c  Rno-Mir-181-P2c  Sha-Mir-181-P2c  Spt-Mir-181-P2c3  Spt-Mir-181-P2c4  Sto-Mir-181-P2c  Tni-Mir-181-P2c1-v1  Tni-Mir-181-P2c1-v2  Tni-Mir-181-P2c2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980397: 3680901-3680964 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCCCCCUGGGCCACCGCAAAAGUCACAAUCAACAUUCAUUGUUGUCGGUGGGUUGUGAAGAGCGAGGCCAGACCCACCGAAGGAUGAAUGUCACUGUGGCUGGGCCAGACACGACCUGAGGAGG
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Structure
        10        20           30        40        50        60  
GCCCCCUGGGCCACCGCAAA---|      AUCA         GUUG          GUGAAGA 
                       AGUCACA    ACAUUCAUU    UCGGUGGGUU       G
                       UCGGUGU    UGUAAGUAG    AGCCACCCAG       C
GGAGGAGUCCAGCACAGACCGGG^      CAC-         GA--          ACCGGAG 
  120       110       100         90          80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ete-Mir-181-P2c_5p
mirBase accessionNone
Sequence 
0- AACAUUCAUUGUUGUCGGUGGGUU -24
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Star sequence

Ete-Mir-181-P2c_3p* (predicted)
mirBase accessionNone
Sequence 
42- CCCACCGAAGGAUGAAUGUCAC -64
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