| MirGeneDB ID | Spt-Mir-181-P1c |
|---|---|
| Family name | MIR-181 (all species) |
| Seed | ACAUUCA |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-181-P1a Spt-Mir-181-P1b Spt-Mir-181-P2a Spt-Mir-181-P2b Spt-Mir-181-P2c3 Spt-Mir-181-P2c4 |
| Orthologues | Aca-Mir-181-P1c Ami-Mir-181-P1c Bta-Mir-181-P1c Cfa-Mir-181-P1c Cja-Mir-181-P1c Cmi-Mir-181-P1c Cpi-Mir-181-P1c Cpo-Mir-181-P1c Dno-Mir-181-P1c Dre-Mir-181-P1c1 Dre-Mir-181-P1c2 Eca-Mir-181-P1c Ete-Mir-181-P1c Gja-Mir-181-P1c Gmo-Mir-181-P1c1 Gmo-Mir-181-P1c2 Hsa-Mir-181-P1c Laf-Mir-181-P1c Lch-Mir-181-P1c Loc-Mir-181-P1c Mal-Mir-181-P1c1 Mal-Mir-181-P1c2 Mdo-Mir-181-P1c Mml-Mir-181-P1c Mmr-Mir-181-P1c Mmu-Mir-181-P1c Mun-Mir-181-P1c Neu-Mir-181-P1c Oan-Mir-181-P1c Ocu-Mir-181-P1c Pab-Mir-181-P1c Pbv-Mir-181-P1c Rno-Mir-181-P1c Sha-Mir-181-P1c Sto-Mir-181-P1c Tni-Mir-181-P1c1 Tni-Mir-181-P1c2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01000882.1: 194301-194362 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCCUCUUCUCAAACGCCCAAGGUCUCGGGGAACAUUCAACGCUGUCGGUGAGUUUUGUCCUCCCAGUUAAACCAUCGACCGUUGAGUGUACCCUGGGGCUGGAGCGGCAGCGAGACCCAGGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCCUCUUCUCAAACGCCCAA--| A CU A UUUGUCCU GGUCUCGGGG ACAUUCAACG GUCGGUG GU \ UCGGGGUCCC UGUGAGUUGC CAGCUAC CA C AGGACCCAGAGCGACGGCGAGG^ A -- - AAUUGACC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Spt-Mir-181-P1c_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AACAUUCAACGCUGUCGGUGAGU -23
Get sequence
|
| Star sequence | Spt-Mir-181-P1c_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- ACCAUCGACCGUUGAGUGUACC -62
Get sequence
|
