Mir-181-P2b

MirGeneDB ID

Mml-Mir-181-P2b

Family name

MIR-181 (all species)

Seed

ACAUUCA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-181b-2

Paralogues

Mml-Mir-181-P1a Mml-Mir-181-P1b Mml-Mir-181-P1c Mml-Mir-181-P2a Mml-Mir-181-P2c

Orthologues

Aca-Mir-181-P2b Ami-Mir-181-P2b Bta-Mir-181-P2b Cfa-Mir-181-P2b Cja-Mir-181-P2b Cli-Mir-181-P2b Cmi-Mir-181-P2b Cpi-Mir-181-P2b Cpo-Mir-181-P2b Dno-Mir-181-P2b Dre-Mir-181-P2b2 Eca-Mir-181-P2b Ete-Mir-181-P2b Gga-Mir-181-P2b Gja-Mir-181-P2b Gmo-Mir-181-P2b2 Hsa-Mir-181-P2b Laf-Mir-181-P2b Lch-Mir-181-P2b Loc-Mir-181-P2b Mal-Mir-181-P2b2 Mdo-Mir-181-P2b Mmr-Mir-181-P2b Mmu-Mir-181-P2b Mun-Mir-181-P2b Neu-Mir-181-P2b Oan-Mir-181-P2b Ocu-Mir-181-P2b Pab-Mir-181-P2b Pbv-Mir-181-P2b Rno-Mir-181-P2b Sha-Mir-181-P2b Spt-Mir-181-P2b Sto-Mir-181-P2b Tgu-Mir-181-P2b Tni-Mir-181-P2b1 Xla-Mir-181-P2b3 Xla-Mir-181-P2b4 Xtr-Mir-181-P2b

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014350.1: 15980574-15980633 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-181-P2b)

Mir-181-P2b CM014350.1: 15980574-15980633 [-] UCSC Ensembl
Mir-181-P1b CM014350.1: 15981797-15981856 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CACCAACUGAAAACACUGAUGGCUGCACUCAACAUUCAUUGCUGUCGGUGGGUUUGAGUCUGAAUCAACUCACUGAUCGAUGAAUGCAAACUGCGGACCAAACAACCCAAAGGAAGCAAA

Get precursor sequence

Structure

        10         20         30        40        50        60
CACCAACUGAAAACACUGA-   -|    CUCAA         CU           UGAGU 
                    UGG CUGCA     CAUUCAUUG  GUCGGUGGGUU     C
                    ACC GGCGU     GUAAGUAGC  UAGUCACUCAA     U
AAACGAAGGAAACCCAACAA   A^    CAAAC         --           CUAAG 
.       110       100        90        80          70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-181-P2b_5p

mirBase accession

MIMAT0002623

Sequence

0- AACAUUCAUUGCUGUCGGUGGGUU -24

Get sequence

Proposed targets

TargetScanVert: mml-miR-181b-5p

Star sequence

Mml-Mir-181-P2b_3p*

mirBase accession

MIMAT0031042

Sequence

38- CUCACUGAUCGAUGAAUGCAAA -60

Get sequence

Proposed targets

TargetScanVert: mml-miR-181b-2-3p