MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-181-P2b

Family name MIR-181 (all species)
Seed ACAUUCA
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-181-P1a  Loc-Mir-181-P1b  Loc-Mir-181-P1c  Loc-Mir-181-P2a  Loc-Mir-181-P2c 
Orthologues Aca-Mir-181-P2b  Ami-Mir-181-P2b  Bta-Mir-181-P2b  Cfa-Mir-181-P2b  Cja-Mir-181-P2b  Cli-Mir-181-P2b  Cmi-Mir-181-P2b  Cpi-Mir-181-P2b  Cpo-Mir-181-P2b  Dno-Mir-181-P2b  Dre-Mir-181-P2b2  Eca-Mir-181-P2b  Ete-Mir-181-P2b  Gga-Mir-181-P2b  Gja-Mir-181-P2b  Gmo-Mir-181-P2b2  Hsa-Mir-181-P2b  Laf-Mir-181-P2b  Lch-Mir-181-P2b  Mal-Mir-181-P2b2  Mdo-Mir-181-P2b  Mml-Mir-181-P2b  Mmr-Mir-181-P2b  Mmu-Mir-181-P2b  Mun-Mir-181-P2b  Neu-Mir-181-P2b  Oan-Mir-181-P2b  Ocu-Mir-181-P2b  Pab-Mir-181-P2b  Pbv-Mir-181-P2b  Rno-Mir-181-P2b  Sha-Mir-181-P2b  Spt-Mir-181-P2b  Sto-Mir-181-P2b  Tgu-Mir-181-P2b  Tni-Mir-181-P2b1  Xla-Mir-181-P2b3  Xla-Mir-181-P2b4  Xtr-Mir-181-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG21: 12498727-12498786 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCGAGUAAGUAAACAGUAAUGGCUGCAAUAAACAUUCAUUGCUGUCGGUGGGUUUUACAUGGAAACAACUCACUGAUCAAUGAAUGCAAACUGCGGUUCAACAACCCCAAGCUCUUUUCA
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Structure
        10         20         30        40        50        60
CCGAGUAAGUAAACAGUAA-  -|     AUAAA         CU           UUACA 
                    UG GCUGCA     CAUUCAUUG  GUCGGUGGGUU     U
                    AC UGGCGU     GUAAGUAAC  UAGUCACUCAA     G
ACUUUUCUCGAACCCCAACA  U^     CAAAC         --           CAAAG 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-181-P2b_5p
mirBase accessionNone
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUU -24
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Star sequence

Loc-Mir-181-P2b_3p*
mirBase accessionNone
Sequence 
38- CUCACUGAUCAAUGAAUGCAAA -60
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