MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-181-P2b1

Family name MIR-181 (all species)
Seed ACAUUCA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-181b-2
Paralogues Tni-Mir-181-P1a1  Tni-Mir-181-P1b1  Tni-Mir-181-P1c1  Tni-Mir-181-P1c2  Tni-Mir-181-P2a1  Tni-Mir-181-P2c1-v1  Tni-Mir-181-P2c1-v2  Tni-Mir-181-P2c2 
Orthologues Aca-Mir-181-P2b  Ami-Mir-181-P2b  Bta-Mir-181-P2b  Cfa-Mir-181-P2b  Cja-Mir-181-P2b  Cli-Mir-181-P2b  Cmi-Mir-181-P2b  Cpi-Mir-181-P2b  Cpo-Mir-181-P2b  Dno-Mir-181-P2b  Eca-Mir-181-P2b  Ete-Mir-181-P2b  Gga-Mir-181-P2b  Gja-Mir-181-P2b  Hsa-Mir-181-P2b  Laf-Mir-181-P2b  Lch-Mir-181-P2b  Loc-Mir-181-P2b  Mdo-Mir-181-P2b  Mml-Mir-181-P2b  Mmr-Mir-181-P2b  Mmu-Mir-181-P2b  Mun-Mir-181-P2b  Neu-Mir-181-P2b  Oan-Mir-181-P2b  Ocu-Mir-181-P2b  Pab-Mir-181-P2b  Pbv-Mir-181-P2b  Rno-Mir-181-P2b  Sha-Mir-181-P2b  Spt-Mir-181-P2b  Sto-Mir-181-P2b  Tgu-Mir-181-P2b  Xtr-Mir-181-P2b 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 Un_random: 59809215-59809273 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGUCGGCGCUCAGUCUUCAGCUCGCAAUAAACAUUCAUUGCUGUCGGUGGGUUUCCAUGGCAAUAGCUCGCUGACCAAUGAAUGAAGACUGCGGGUAAAAAAGCUAUUCAAAGUACGA
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Structure
        10        20          30        40        50          
CGGUCGGCGCUCAGUCUUCA--|      AUAAA         CU           UCCAU 
                      GCUCGCA     CAUUCAUUG  GUCGGUGGGUU     \
                      UGGGCGU     GUAAGUAAC  CAGUCGCUCGA     G
AGCAUGAAACUUAUCGAAAAAA^      CAGAA         --           UAACG 
       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-181-P2b1_5p
mirBase accessionMIMAT0003004
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUUU -25
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Star sequence

Tni-Mir-181-P2b1_3p* (predicted)
mirBase accessionNone
Sequence 
36- GCUCGCUGACCAAUGAAUGAAGA -59
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