MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-181-P2b4

Family name MIR-181 (all species)
Seed ACAUUCA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-181-P1a3  Xla-Mir-181-P1a4  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xla-Mir-181-P2a3  Xla-Mir-181-P2a4  Xla-Mir-181-P2b3 
Orthologues Aca-Mir-181-P2b  Ami-Mir-181-P2b  Bta-Mir-181-P2b  Cfa-Mir-181-P2b  Cja-Mir-181-P2b  Cli-Mir-181-P2b  Cmi-Mir-181-P2b  Cpi-Mir-181-P2b  Cpo-Mir-181-P2b  Dno-Mir-181-P2b  Eca-Mir-181-P2b  Ete-Mir-181-P2b  Gga-Mir-181-P2b  Gja-Mir-181-P2b  Hsa-Mir-181-P2b  Laf-Mir-181-P2b  Lch-Mir-181-P2b  Loc-Mir-181-P2b  Mdo-Mir-181-P2b  Mml-Mir-181-P2b  Mmr-Mir-181-P2b  Mmu-Mir-181-P2b  Mun-Mir-181-P2b  Neu-Mir-181-P2b  Oan-Mir-181-P2b  Ocu-Mir-181-P2b  Pab-Mir-181-P2b  Pbv-Mir-181-P2b  Rno-Mir-181-P2b  Sha-Mir-181-P2b  Spt-Mir-181-P2b  Sto-Mir-181-P2b  Tgu-Mir-181-P2b  Xtr-Mir-181-P2b 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030739.1: 40078885-40078944 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGAGCGGCACACGAUAAUGGCUGCAAUAAACAUUCAUUGCUGUCGGUGGGUUGUAGUUUAGAAUAGCUCAUUGAUCAAUGAAUGCAAACUGCAGGCCACUCAACAAAGCUGAGAGAGG
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Structure
        10         20         30        40        50        60
GCAGAGCGGCACACGAUAA-   -|    AUAAA         CU           GUAGU 
                    UGG CUGCA     CAUUCAUUG  GUCGGUGGGUU     U
                    ACC GACGU     GUAAGUAAC  UAGUUACUCGA     U
GGAGAGAGUCGAAACAACUC   G^    CAAAC         --           UAAGA 
.       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-181-P2b4_5p
mirBase accessionNone
Sequence 
0- AACAUUCAUUGCUGUCGGUGGGUU -24
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Star sequence

Xla-Mir-181-P2b4_3p* (predicted)
mirBase accessionNone
Sequence 
38- CUCAUUGAUCAAUGAAUGCAAA -60
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