MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-181-P1b

Family name MIR-181 (all species)
Seed ACAUUCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-181a-2
Paralogues Hsa-Mir-181-P1a  Hsa-Mir-181-P1c  Hsa-Mir-181-P2a  Hsa-Mir-181-P2b  Hsa-Mir-181-P2c 
Orthologues Aca-Mir-181-P1b  Ami-Mir-181-P1b  Bta-Mir-181-P1b  Cfa-Mir-181-P1b  Cja-Mir-181-P1b  Cli-Mir-181-P1b  Cmi-Mir-181-P1b  Cpi-Mir-181-P1b  Cpo-Mir-181-P1b  Dno-Mir-181-P1b  Dre-Mir-181-P1b2  Eca-Mir-181-P1b  Ete-Mir-181-P1b  Gga-Mir-181-P1b  Gja-Mir-181-P1b  Gmo-Mir-181-P1b2  Laf-Mir-181-P1b  Lch-Mir-181-P1b  Loc-Mir-181-P1b  Mal-Mir-181-P1b2  Mdo-Mir-181-P1b  Mml-Mir-181-P1b  Mmr-Mir-181-P1b  Mmu-Mir-181-P1b  Mun-Mir-181-P1b  Neu-Mir-181-P1b  Oan-Mir-181-P1b  Ocu-Mir-181-P1b  Pab-Mir-181-P1b  Pbv-Mir-181-P1b  Rno-Mir-181-P1b  Sha-Mir-181-P1b  Spt-Mir-181-P1b  Sto-Mir-181-P1b  Tgu-Mir-181-P1b  Tni-Mir-181-P1b1  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xtr-Mir-181-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)
chr9: 124692480-124692539 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-181-P1b)
Mir-181-P1b chr9: 124692480-124692539 [+] UCSC Ensembl
Mir-181-P2b chr9: 124693725-124693784 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCAGGCCAGCCUUCAGAGGACUCCAAGGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUUGAAAAAACCACUGACCGUUGACUGUACCUUGGGGUCCUUACAGACGACACUACAUUUC
Get precursor sequence
Structure
        10          20        30        40        50        60 
UAUCAGGCCAGCCUUCA--|            A   U      CU       A  UUGGGAU 
                   GAGGACUCCAAGG ACA UCAACG  GUCGGUG GU       \
                   UUCCUGGGGUUCC UGU AGUUGC  CAGUCAC CA       U
CUUUACAUCACAGCAGACA^            A   C      --       -  AAAAAGU 
.       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-181-P1b_5p

mirBase accessionMIMAT0000256
Sequence
0- AACAUUCAACGCUGUCGGUGAGU -23
Get sequence
Proposed targets microrna.org: MIMAT0000256
TargetScanVert: hsa-miR-181a-5p
TargetMiner: hsa-miR-181a-5p
miRDB: MIMAT0000256
Star sequence

Hsa-Mir-181-P1b_3p*

mirBase accessionMIMAT0004558
Sequence
38- ACCACUGACCGUUGACUGUACC -60
Get sequence
Proposed targets microrna.org: MIMAT0004558
TargetScanVert: hsa-miR-181a-2-3p
TargetMiner: hsa-miR-181a-2-3p
miRDB: MIMAT0004558