MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-181-P1b

Family name MIR-181 (all species)
Seed ACAUUCA
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-181-P1a  Gja-Mir-181-P1c  Gja-Mir-181-P2a  Gja-Mir-181-P2b 
Orthologues Aca-Mir-181-P1b  Ami-Mir-181-P1b  Bta-Mir-181-P1b  Cfa-Mir-181-P1b  Cja-Mir-181-P1b  Cli-Mir-181-P1b  Cmi-Mir-181-P1b  Cpi-Mir-181-P1b  Cpo-Mir-181-P1b  Dno-Mir-181-P1b  Dre-Mir-181-P1b2  Eca-Mir-181-P1b  Ete-Mir-181-P1b  Gga-Mir-181-P1b  Gmo-Mir-181-P1b2  Hsa-Mir-181-P1b  Laf-Mir-181-P1b  Lch-Mir-181-P1b  Loc-Mir-181-P1b  Mal-Mir-181-P1b2  Mdo-Mir-181-P1b  Mml-Mir-181-P1b  Mmr-Mir-181-P1b  Mmu-Mir-181-P1b  Mun-Mir-181-P1b  Neu-Mir-181-P1b  Oan-Mir-181-P1b  Ocu-Mir-181-P1b  Pab-Mir-181-P1b  Pbv-Mir-181-P1b  Rno-Mir-181-P1b  Sha-Mir-181-P1b  Spt-Mir-181-P1b  Sto-Mir-181-P1b  Tgu-Mir-181-P1b  Tni-Mir-181-P1b1  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xtr-Mir-181-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015173680.1: 1363548-1363608 [-]
Precursor
(pre-Mir +30nt flank)
CCUGCAGCCAGCCUCAGGAUAGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGAAAUUCAGAGUAAACCAUCGACCGUUGACUGUACCUUGAGGUUUAUCACAGACACAUGGAAAACU
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Structure
        10         20         30        40        50        60 
CCUGCAGCCAGCCUCAG-   -|       UGA   U      CU       A  UUGAAAU 
                  GAU AGCUUCAG   ACA UCAACG  GUCGGUG GU       U
                  CUA UUGGAGUU   UGU AGUUGC  CAGCUAC CA       C
UCAAAAGGUACACAGACA   U^       CCA   C      --       -  AAUGAGA 
 .       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-181-P1b_5p
mirBase accessionNone
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Star sequence

Gja-Mir-181-P1b_3p*
mirBase accessionNone
Sequence 
39- ACCAUCGACCGUUGACUGUACC -61
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