MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-181-P1b

Family name MIR-181 (all species)
Seed ACAUUCA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-181-P1a  Laf-Mir-181-P1c  Laf-Mir-181-P2a  Laf-Mir-181-P2b  Laf-Mir-181-P2c 
Orthologues Aca-Mir-181-P1b  Ami-Mir-181-P1b  Bta-Mir-181-P1b  Cfa-Mir-181-P1b  Cja-Mir-181-P1b  Cli-Mir-181-P1b  Cmi-Mir-181-P1b  Cpi-Mir-181-P1b  Cpo-Mir-181-P1b  Dno-Mir-181-P1b  Dre-Mir-181-P1b2  Eca-Mir-181-P1b  Ete-Mir-181-P1b  Gga-Mir-181-P1b  Gja-Mir-181-P1b  Gmo-Mir-181-P1b2  Hsa-Mir-181-P1b  Lch-Mir-181-P1b  Loc-Mir-181-P1b  Mal-Mir-181-P1b2  Mdo-Mir-181-P1b  Mml-Mir-181-P1b  Mmr-Mir-181-P1b  Mmu-Mir-181-P1b  Mun-Mir-181-P1b  Neu-Mir-181-P1b  Oan-Mir-181-P1b  Ocu-Mir-181-P1b  Pab-Mir-181-P1b  Pbv-Mir-181-P1b  Rno-Mir-181-P1b  Sha-Mir-181-P1b  Spt-Mir-181-P1b  Sto-Mir-181-P1b  Tgu-Mir-181-P1b  Tni-Mir-181-P1b1  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xtr-Mir-181-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010033.1: 33395589-33395648 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAAGAUCCAGCCUUCAGAGGACUCCAAAGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUUGAAAAAACCACUGACCGUUGACUGUACCUUGCGGUCCUUAACAGACAACGCCACAUUU
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Structure
        10          20        30        40        50        60 
CCAAGAUCCAGCCUUCA--|      C   AGA   U      CU       A  UUGGGAU 
                   GAGGACU CAA   ACA UCAACG  GUCGGUG GU       \
                   UUCCUGG GUU   UGU AGUUGC  CAGUCAC CA       U
UUUACACCGCAACAGACAA^      C   CCA   C      --       -  AAAAAGU 
.       110       100        90        80           70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-181-P1b_5p
mirBase accessionNone
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Star sequence

Laf-Mir-181-P1b_3p* (predicted)
mirBase accessionNone
Sequence 
38- ACCACUGACCGUUGACUGUACC -60
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