| MirGeneDB ID | Laf-Mir-181-P1a |
|---|---|
| Family name | MIR-181 (all species) |
| Seed | ACAUUCA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-181-P1b Laf-Mir-181-P1c Laf-Mir-181-P2a Laf-Mir-181-P2b Laf-Mir-181-P2c |
| Orthologues | Aca-Mir-181-P1a Ami-Mir-181-P1a Bta-Mir-181-P1a Cfa-Mir-181-P1a Cja-Mir-181-P1a Cli-Mir-181-P1a Cmi-Mir-181-P1a Cpi-Mir-181-P1a Cpo-Mir-181-P1a Dno-Mir-181-P1a Dre-Mir-181-P1a1 Dre-Mir-181-P1a2 Eca-Mir-181-P1a Ete-Mir-181-P1a Gga-Mir-181-P1a Gja-Mir-181-P1a Gmo-Mir-181-P1a1 Hsa-Mir-181-P1a Lch-Mir-181-P1a Loc-Mir-181-P1a Mal-Mir-181-P1a1 Mdo-Mir-181-P1a Mml-Mir-181-P1a Mmr-Mir-181-P1a Mmu-Mir-181-P1a Mun-Mir-181-P1a Neu-Mir-181-P1a Oan-Mir-181-P1a Ocu-Mir-181-P1a Pab-Mir-181-P1a Rno-Mir-181-P1a Sha-Mir-181-P1a Spt-Mir-181-P1a Sto-Mir-181-P1a Tgu-Mir-181-P1a Tni-Mir-181-P1a1 Xla-Mir-181-P1a3 Xla-Mir-181-P1a4 Xtr-Mir-181-P1a |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010040.1: 2235784-2235845 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGAAUUCUGAGUUUAGAGGUUGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGGAAUUAAAAUCAAAACCAUCGACCGUUGAUUGUACCCUAAGGCUAACCAACAUCUACUCCAUGACAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AGAAUUCUGAGUUUAGA- -| C UGA U CU A UUGGAAUU GGUU GCUU AG ACA UCAACG GUCGGUG GU \ CCAA CGGA UC UGU AGUUGC CAGCUAC CA A ACAGUACCUCAUCUACAA U^ A CCA U -- - AAACUAAA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-181-P1a_5p |
| mirBase accession | None |
| Sequence |
0- AACAUUCAACGCUGUCGGUGAGU -23
Get sequence
|
| Star sequence | Laf-Mir-181-P1a_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- ACCAUCGACCGUUGAUUGUACC -62
Get sequence
|
