Mir-181-P1b

MirGeneDB ID

Mun-Mir-181-P1b

Family name

MIR-181 (all species)

Seed

ACAUUCA

Species

Microcaecilia (Microcaecilia unicolor)

MiRBase ID

Paralogues

Mun-Mir-181-P1a Mun-Mir-181-P1c Mun-Mir-181-P2a Mun-Mir-181-P2b Mun-Mir-181-P2c

Orthologues

Aca-Mir-181-P1b Ami-Mir-181-P1b Bta-Mir-181-P1b Cfa-Mir-181-P1b Cli-Mir-181-P1b Cmi-Mir-181-P1b Cpi-Mir-181-P1b Cpo-Mir-181-P1b Dno-Mir-181-P1b Dre-Mir-181-P1b2 Ete-Mir-181-P1b Gga-Mir-181-P1b Gja-Mir-181-P1b Gmo-Mir-181-P1b2 Hsa-Mir-181-P1b Lch-Mir-181-P1b Loc-Mir-181-P1b Mal-Mir-181-P1b2 Mdo-Mir-181-P1b Mml-Mir-181-P1b Mmu-Mir-181-P1b Oan-Mir-181-P1b Ocu-Mir-181-P1b Pbv-Mir-181-P1b Rno-Mir-181-P1b Sha-Mir-181-P1b Spt-Mir-181-P1b Sto-Mir-181-P1b Tgu-Mir-181-P1b Tni-Mir-181-P1b1 Xla-Mir-181-P1b3 Xla-Mir-181-P1b4 Xtr-Mir-181-P1b

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(Mun_miRNA_loci)

181-P1b_LR594637.1:269162112-269162372: 101-161 [+]

Precursor
(pre-Mir +30nt flank)

GAACACACUAACUUUUUGAUGGCUUCAGCGAACAUUCAACGCUGUCGGUGAGUUUGAGUUAUCAUAGAAACCAUCGACCGUUGACUGUGCCUUGAGGUUUUAUCACAGACACACACUUUCA

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Structure

        10        20          30        40        50        60 
GAACACACUAACUUUUUGAU--|       CGA   U      CU       A  UUGAGUU 
                      GGCUUCAG   ACA UCAACG  GUCGGUG GU       A
                      UUGGAGUU   UGU AGUUGC  CAGCUAC CA       U
ACUUUCACACACAGACACUAUU^       CCG   C      --       -  AAGAUAC 
 .       110       100        90        80           70

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14)

Tissue expression

To

Mature sequence

Mun-Mir-181-P1b_5p

mirBase accession

None

Sequence

0- AACAUUCAACGCUGUCGGUGAGU -23

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Star sequence

Mun-Mir-181-P1b_3p*

mirBase accession

None

Sequence

39- ACCAUCGACCGUUGACUGUGCC -61

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