MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-499-P3

Family name MIR-499 (all species)
Seed UAAGACU
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-499-P4 
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mdo-Mir-499  Mml-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Xtr-Mir-499 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030740.1: 33360863-33360923 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAGCGUCUUCUAUAUGAGAGCGAGGCAGUUAAGACUUGCAGUGAUGUUUAGUUAAAAUCUUUUCAUGAACAUCACUUUAAGUCUGUACUGCUUCUCCCUCUUUUCCACUCGUCAAGGCU
Get precursor sequence
Structure
        10        20          30        40        50          
UGGAGCGUCUUCUAUAUG    C--|       UA       C           GUUAAAA 
                  AGAG   GAGGCAGU  AGACUUG AGUGAUGUUUA       \
                  UCUC   CUUCGUCA  UCUGAAU UCACUACAAGU       U
UCGGAACUGCUCACCUUU    CCU^       UG       U           ACUUUUC 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-499-P3_5p
mirBase accessionNone
Sequence 
0- UUAAGACUUGCAGUGAUGUUUA -22
Get sequence
Star sequence

Xla-Mir-499-P3_3p* (predicted)
mirBase accessionNone
Sequence 
39- AACAUCACUUUAAGUCUGUACU -61
Get sequence