MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-499

Family name MIR-499 (all species)
Seed UAAGACU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID
Paralogues
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Dre-Mir-499-P1  Dre-Mir-499-P2  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Gmo-Mir-499-P1  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mal-Mir-499-P1  Mml-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Tni-Mir-499-P1  Xla-Mir-499-P3  Xla-Mir-499-P4  Xtr-Mir-499 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 1: 388424219-388424277 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGUCCCCUGCCUCCCCGGGCGGGCAGCUGUUAAGACUUGCAGUGAUGUUUAAUUCUUCUCUAUGUGAACAUCACAACAAGUCUAUACAGUUUCCCGGCUCCAUACCUCUGGGACCAGG
Get precursor sequence
Structure
        10         20         30        40        50         
UGGUCCCCUGCCUCCCC-   -|   C      UA       CA          AUUCUU 
                  GGG CGGG AGCUGU  AGACUUG  GUGAUGUUUA      \
                  CUC GCCC UUGACA  UCUGAAC  CACUACAAGU      C
GGACCAGGGUCUCCAUAC   G^   U      UA       AA          GUAUCU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-499_5p
mirBase accessionNone
Sequence 
0- UUAAGACUUGCAGUGAUGUUUA -22
Get sequence
Star sequence

Mdo-Mir-499_3p*
mirBase accessionNone
Sequence 
37- AACAUCACAACAAGUCUAUACA -59
Get sequence