MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-499

Family name MIR-499 (all species)
Seed UAAGACU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-499
Paralogues
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Dre-Mir-499-P1  Dre-Mir-499-P2  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gja-Mir-499  Gmo-Mir-499-P1  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mal-Mir-499-P1  Mdo-Mir-499  Mml-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Tni-Mir-499-P1  Xla-Mir-499-P3  Xla-Mir-499-P4  Xtr-Mir-499 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 20: 2603260-2603319 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCUCCUUCACCUUUGAGGGAGCGGCAGUUAAGACUUGUAGUGAUGUUUAGAUAAUGUAUUACAUGAACAUCACUUUAAGUCUGUGCUACUUCUCUCCUCAUUCUUGUCGGCGGGAAG
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Structure
        10         20         30        40        50         
GCAGCUCCUUCACCUUU-    -|  C  C   UA       U           GAUAAU 
                  GAGG GAG GG AGU  AGACUUG AGUGAUGUUUA      G
                  CUCC CUC UC UCG  UCUGAAU UCACUACAAGU      U
GAAGGGCGGCUGUUCUUA    U^  U  A   UG       U           ACAUUA 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-499_5p
mirBase accessionMIMAT0003367
Sequence 
0- UUAAGACUUGUAGUGAUGUUUA -22
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Proposed targets TargetScanVert: gga-miR-499-5p
miRDB: MIMAT0003367
Star sequence

Gga-Mir-499_3p*
mirBase accessionMIMAT0026634
Sequence 
38- AACAUCACUUUAAGUCUGUGCU -60
Get sequence
Proposed targets TargetScanVert: gga-miR-499-3p
miRDB: MIMAT0026634