MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-499-P4

Family name MIR-499 (all species)
Seed UAAGACU
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-499
Paralogues Xla-Mir-499-P3 
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mdo-Mir-499  Mml-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Xtr-Mir-499 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030741.1: 30337791-30337851 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAGCACCUUCCCUGUGAGAGUGAGGCAGUUAAGACUUGCAGUGAUGUUUAGUUAAAAUCUUUUCAUGAACAUCACUUUAAGUCUGUACUGCUUCUCCCUCUUUUCCACUCAUCAAGAUC
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Structure
        10          20        30        40        50          
UGGAGCACCUUCCCUGU--|  AGU        UA       C           GUUAAAA 
                   GAG   GAGGCAGU  AGACUUG AGUGAUGUUUA       \
                   CUC   CUUCGUCA  UCUGAAU UCACUACAAGU       U
CUAGAACUACUCACCUUUU^  CCU        UG       U           ACUUUUC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-499-P4_5p
mirBase accessionMIMAT0046607
Sequence 
0- UUAAGACUUGCAGUGAUGUUUA -22
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Star sequence

Xla-Mir-499-P4_3p* (predicted)
mirBase accessionMIMAT0046608
Sequence 
39- AACAUCACUUUAAGUCUGUACU -61
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