MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-138-P2

Family name MIR-138 (all species)
Seed GCUGGUG
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-138-P1 
Orthologues Aca-Mir-138-P2  Ami-Mir-138-P2  Bta-Mir-138-P2  Cfa-Mir-138-P2  Cja-Mir-138-P2  Cli-Mir-138-P2  Cpi-Mir-138-P2  Cpo-Mir-138-P2  Dno-Mir-138-P2  Dre-Mir-138-P2  Eca-Mir-138-P2  Ete-Mir-138-P2  Gga-Mir-138-P2  Gja-Mir-138-P2  Gmo-Mir-138-P2  Hsa-Mir-138-P2  Laf-Mir-138-P2  Lch-Mir-138-P2  Loc-Mir-138-P2  Mal-Mir-138-P2  Mdo-Mir-138-P2  Mml-Mir-138-P2  Mmr-Mir-138-P2  Mmu-Mir-138-P2  Neu-Mir-138-P2  Oan-Mir-138-P2  Ocu-Mir-138-P2  Pab-Mir-138-P2  Pbv-Mir-138-P2  Pma-Mir-138-o2  Rno-Mir-138-P2  Sha-Mir-138-P2  Spt-Mir-138-P2  Sto-Mir-138-P2  Tgu-Mir-138-P2  Tni-Mir-138-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636043.1: 666124-666190 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGCUGCCAGAACCAGGUAUUGGUGCUGCAGCUGGUGUUGUGAAUCAGGCCGGCAAAAGCAGCUGCUACGAUCCGGCUAUUUCACAACACCAGGGUCGCACCGUACCACUCUCAUCACUCCAGCAG
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Structure
        10           20        30        40        50        60    
CUUGCUGCCAGAACCAG---|   U     U  AG             UCA      CAAAAGCAG 
                    GUAU GGUGC GC  CUGGUGUUGUGAA   GGCCGG         \
                    CAUG CCACG UG  GACCACAACACUU   UCGGCC         C
GACGACCUCACUACUCUCAC^   -     C  G-             UA-      UAGCAUCGU 
     120       110        100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-138-P2_5p
mirBase accessionNone
Sequence 
0- AGCUGGUGUUGUGAAUCAGGCCGG -24
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Star sequence

Cmi-Mir-138-P2_3p*
mirBase accessionNone
Sequence 
45- GGCUAUUUCACAACACCAGGGU -67
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