MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-138-P2

Family name MIR-138 (all species)
Seed GCUGGUG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-138-2
Paralogues Cpo-Mir-138-P1 
Orthologues Aca-Mir-138-P2  Ami-Mir-138-P2  Bta-Mir-138-P2  Cfa-Mir-138-P2  Cli-Mir-138-P2  Cmi-Mir-138-P2  Cpi-Mir-138-P2  Dno-Mir-138-P2  Dre-Mir-138-P2  Ete-Mir-138-P2  Gga-Mir-138-P2  Gja-Mir-138-P2  Gmo-Mir-138-P2  Hsa-Mir-138-P2  Lch-Mir-138-P2  Loc-Mir-138-P2  Mal-Mir-138-P2  Mdo-Mir-138-P2  Mml-Mir-138-P2  Mmu-Mir-138-P2  Oan-Mir-138-P2  Ocu-Mir-138-P2  Pbv-Mir-138-P2  Pma-Mir-138-o2  Rno-Mir-138-P2  Sha-Mir-138-P2  Spt-Mir-138-P2  Sto-Mir-138-P2  Tgu-Mir-138-P2  Tni-Mir-138-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)		 scaffold_22: 25185275-25185342 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GAAGCCGGCAGAGUUCUGGUAUCUUGCUGCAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUGCAUCAUACCCAUUCUCUCCAGGCGAGCC
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Structure
        10          20        30        40        50        60    
GAAGCCGGCAGAGUUCU--|    CU   U  AG             UCA     ACGAGCAGCG 
                   GGUAU  UGC GC  CUGGUGUUGUGAA   GGCCG          C
                   CCAUA  ACG UG  GACCACAGCACUU   UCGGC          A
CCGAGCGGACCUCUCUUAC^    CU   U  G-             UA-     CCAUUCUCCU 
      120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cpo-Mir-138-P2_5p
mirBase accessionMIMAT0046999
Sequence 
0- AGCUGGUGUUGUGAAUCAGGCCG -23
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Star sequence

Cpo-Mir-138-P2_3p*
mirBase accessionMIMAT0047001
Sequence 
47- GCUAUUUCACGACACCAGGGU -68
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