| MirGeneDB ID | Neu-Mir-138-P2 |
|---|---|
| Family name | MIR-138 (all species) |
| Seed | GCUGGUG |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-138-P1 |
| Orthologues | Aca-Mir-138-P2 Ami-Mir-138-P2 Bta-Mir-138-P2 Cfa-Mir-138-P2 Cja-Mir-138-P2 Cli-Mir-138-P2 Cmi-Mir-138-P2 Cpi-Mir-138-P2 Cpo-Mir-138-P2 Dno-Mir-138-P2 Dre-Mir-138-P2 Eca-Mir-138-P2 Ete-Mir-138-P2 Gga-Mir-138-P2 Gja-Mir-138-P2 Gmo-Mir-138-P2 Hsa-Mir-138-P2 Laf-Mir-138-P2 Lch-Mir-138-P2 Loc-Mir-138-P2 Mal-Mir-138-P2 Mdo-Mir-138-P2 Mml-Mir-138-P2 Mmr-Mir-138-P2 Mmu-Mir-138-P2 Oan-Mir-138-P2 Ocu-Mir-138-P2 Pab-Mir-138-P2 Pbv-Mir-138-P2 Pma-Mir-138-o2 Rno-Mir-138-P2 Sha-Mir-138-P2 Spt-Mir-138-P2 Sto-Mir-138-P2 Tgu-Mir-138-P2 Tni-Mir-138-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 474394341-474394408 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGCCCCCACAGAUUCUGGUAUUGUUGCUGCAGCUGGUGUUGUGAAUCAGGCCGACAAGCAGCUCAUCCUAUUACCCGGCUAUUUCACCACACCAGGGUUGCAUCAUACCGCUCUCCUUCAAAAGGCUGGet precursor sequence |
| Structure | 10 20 30 40 50 60 AGCCCCCACAGAUUCUG---| U U U AG U UCA ACAAGCAGCU GUAU G UGC GC CUGGUGU GUGAA GGCCG C CAUA C ACG UG GACCACA CACUU UCGGC A GUCGGAAAACUUCCUCUCGC^ - U U G- C UA- CCAUUAUCCU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-138-P2_5p |
| mirBase accession | None |
| Sequence |
0- AGCUGGUGUUGUGAAUCAGGCCG -23
Get sequence
|
| Star sequence | Neu-Mir-138-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
47- GCUAUUUCACCACACCAGGGU -68
Get sequence
|
