MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-128-P1

Family name MIR-128 (all species)
Seed CACAGUG
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-128-2
Paralogues Cpi-Mir-128-P2 
Orthologues Aca-Mir-128-P1  Ami-Mir-128-P1  Bta-Mir-128-P1  Cfa-Mir-128-P1  Cja-Mir-128-P1  Cli-Mir-128-P1  Cmi-Mir-128-P1  Cpo-Mir-128-P1  Dno-Mir-128-P1  Dre-Mir-128-P1  Ebu-Mir-128  Eca-Mir-128-P1  Ete-Mir-128-P1  Gga-Mir-128-P1  Gja-Mir-128-P1  Gmo-Mir-128-P1  Hsa-Mir-128-P1  Laf-Mir-128-P1  Lch-Mir-128-P1  Loc-Mir-128-P1  Mal-Mir-128-P1  Mdo-Mir-128-P1  Mml-Mir-128-P1  Mmr-Mir-128-P1  Mmu-Mir-128-P1  Mun-Mir-128-P1  Neu-Mir-128-P1  Oan-Mir-128-P1  Ocu-Mir-128-P1  Pab-Mir-128-P1  Pbv-Mir-128-P1  Pma-Mir-128-o1  Rno-Mir-128-P1  Sha-Mir-128-P1  Spt-Mir-128-P1  Sto-Mir-128-P1  Tgu-Mir-128-P1  Tni-Mir-128-P1  Xla-Mir-128-P1a  Xla-Mir-128-P1b  Xtr-Mir-128-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584736: 1559639-1559696 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAGCUCCCUGAAGCGAUGGGCAGUUGGAAGGGGGGCCGUUACACUGUAAGAGAGUGAGUAGCAGGUCUCACAGUGAACCGGUCUCUUUUCCUACUGUGUCAUGCCACUCCUAAUUAAA
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Structure
        10          20        30        40        50         
UAGCUCCCUGAAGCGAUGG--|    U             UUA      AA    GUGAG 
                     GCAGU GGAAGGGGGGCCG   CACUGU  GAGA     U
                     UGUCA CCUUUUCUCUGGC   GUGACA  CUCU     A
AAAUUAAUCCUCACCGUACUG^    U             CAA      --    GGACG 
      110       100        90        80        70          60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Te Te Te To
Star sequence

Cpi-Mir-128-P1_5p*
mirBase accessionMIMAT0037737
Sequence 
0- GGGGGCCGUUACACUGUAAGAGA -23
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Mature sequence

Cpi-Mir-128-P1_3p
mirBase accessionMIMAT0037736
Sequence 
37- UCACAGUGAACCGGUCUCUUU -58
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