MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-129-P2a

Family name MIR-129 (all species)
Seed UUUUUGC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-129-3
Paralogues Dre-Mir-129-P1a  Dre-Mir-129-P1b  Dre-Mir-129-P2b 
Orthologues Aca-Mir-129-P2  Ami-Mir-129-P2  Bta-Mir-129-P2  Cfa-Mir-129-P2  Cja-Mir-129-P2  Cli-Mir-129-P2  Cmi-Mir-129-P2  Cpi-Mir-129-P2  Cpo-Mir-129-P2  Dno-Mir-129-P2  Eca-Mir-129-P2  Ete-Mir-129-P2  Gja-Mir-129-P2  Gmo-Mir-129-P2a  Hsa-Mir-129-P2  Laf-Mir-129-P2  Lch-Mir-129-P2  Loc-Mir-129-P2  Mal-Mir-129-P2a  Mdo-Mir-129-P2  Mml-Mir-129-P2  Mmr-Mir-129-P2  Mmu-Mir-129-P2  Mun-Mir-129-P2  Neu-Mir-129-P2  Oan-Mir-129-P2  Ocu-Mir-129-P2  Pab-Mir-129-P2  Pbv-Mir-129-P2  Pma-Mir-129-o2  Rno-Mir-129-P2  Sha-Mir-129-P2  Spt-Mir-129-P2  Sto-Mir-129-P2  Tgu-Mir-129-P2  Tni-Mir-129-P2a  Xtr-Mir-129-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Chordata
Genome context
(danRer11)		 chr18: 10670670-10670735 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUAUUUCUCUCGCUUGUCCUUCACGGCUCUUUUUGCGGUCUGGGCUUGCUGUUCCUUAAAUCACCAGUCAGGAAGCCCUUACCCCAAAAAGUAUCUGUGUGGGAUCCUGACAGCUGAUGAUGGG
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Structure
        10          20        30         40        50        60  
CUCUAUUUCUCUCGCUU--     U     CU-|      C   CU      G UGUUCCUUAA 
                   GUCCU CACGG   CUUUUUG GGU  GGGCUU C          \
                   UAGGG GUGUC   GAAAAAC CCA  CCCGAA G          A
GGGUAGUAGUCGACAGUCC     U     UAU^      C   UU      G ACUGACCACU 
    120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-129-P2a_5p
mirBase accessionMIMAT0001825
Sequence 
0- CUUUUUGCGGUCUGGGCUUGC -21
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Star sequence

Dre-Mir-129-P2a_3p*
mirBase accessionMIMAT0048649
Sequence 
44- AAGCCCUUACCCCAAAAAGUAU -66
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