MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-129-P1b

Family name MIR-129 (all species)
Seed UUUUUGC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-129-2
Paralogues Dre-Mir-129-P1a  Dre-Mir-129-P2a  Dre-Mir-129-P2b 
Orthologues Ami-Mir-129-P1  Bta-Mir-129-P1  Cfa-Mir-129-P1  Cja-Mir-129-P1  Cpi-Mir-129-P1  Cpo-Mir-129-P1  Dno-Mir-129-P1  Eca-Mir-129-P1  Ete-Mir-129-P1  Gga-Mir-129-P1  Gja-Mir-129-P1  Gmo-Mir-129-P1b  Hsa-Mir-129-P1  Laf-Mir-129-P1  Lch-Mir-129-P1  Loc-Mir-129-P1  Mal-Mir-129-P1b  Mml-Mir-129-P1  Mmr-Mir-129-P1  Mmu-Mir-129-P1  Mun-Mir-129-P1  Neu-Mir-129-P1  Oan-Mir-129-P1  Ocu-Mir-129-P1  Pab-Mir-129-P1  Pbv-Mir-129-P1  Pma-Mir-129-o1  Rno-Mir-129-P1  Sha-Mir-129-P1  Spt-Mir-129-P1  Tgu-Mir-129-P1  Tni-Mir-129-P1b  Xtr-Mir-129-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Chordata
Genome context
(danRer11)		 chr7: 50287944-50288006 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAAAGCGUAUGGAAAAGUCUUUCACGAAUCUUUUUGCGGUCUGGGCUUGCUGUUCUCAACUAUCAAUGGGAAGCCCUUACCCCAAAAAGCAUUUGCGGAGGGCGCACACGGCGAAUGACAGA
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Structure
        10          20        30         40        50        60
UCAAAGCGUAUGGAAAA--       A     -|      C   CU      G UGUUCUCA 
                   GUCUUUC CGAAU CUUUUUG GGU  GGGCUU C        A
                   CGGGAGG GUUUA GAAAAAC CCA  CCCGAA G        C
AGACAGUAAGCGGCACACG       C     C^      C   UU      G GUAACUAU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-129-P1b_5p
mirBase accessionMIMAT0001825
Sequence 
0- CUUUUUGCGGUCUGGGCUUGC -21
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Star sequence

Dre-Mir-129-P1b_3p*
mirBase accessionMIMAT0003158
Sequence 
41- AAGCCCUUACCCCAAAAAGCAU -63
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